Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DIC78_RS19060 | Genome accession | NZ_CP029364 |
| Coordinates | 3697263..3698333 (+) | Length | 356 a.a. |
| NCBI ID | WP_127696768.1 | Uniprot ID | - |
| Organism | Bacillus halotolerans strain ZB201702 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3692263..3703333
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DIC78_RS19030 (DIC78_19055) | mgsR | 3692511..3692891 (+) | 381 | WP_026014741.1 | transcriptional regulator MgsR | - |
| DIC78_RS19040 (DIC78_19065) | - | 3693124..3693963 (+) | 840 | WP_127696766.1 | STAS domain-containing protein | - |
| DIC78_RS19045 (DIC78_19070) | - | 3694043..3695372 (-) | 1330 | Protein_3681 | hemolysin family protein | - |
| DIC78_RS19050 (DIC78_19075) | - | 3695516..3696469 (+) | 954 | WP_095713277.1 | magnesium transporter CorA family protein | - |
| DIC78_RS19055 (DIC78_19080) | - | 3696532..3696942 (+) | 411 | WP_106020097.1 | CBS domain-containing protein | - |
| DIC78_RS19060 (DIC78_19085) | comGA | 3697263..3698333 (+) | 1071 | WP_127696768.1 | competence protein ComGA | Machinery gene |
| DIC78_RS19065 (DIC78_19090) | comGB | 3698320..3699357 (+) | 1038 | WP_127696769.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DIC78_RS19070 (DIC78_19095) | comGC | 3699371..3699667 (+) | 297 | WP_010334925.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DIC78_RS19075 (DIC78_19100) | comGD | 3699657..3700088 (+) | 432 | WP_044154579.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DIC78_RS19080 (DIC78_19105) | comGE | 3700072..3700419 (+) | 348 | WP_127696770.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DIC78_RS19085 (DIC78_19110) | comGF | 3700445..3700828 (+) | 384 | WP_038954226.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DIC78_RS19090 (DIC78_19115) | comGG | 3700829..3701203 (+) | 375 | WP_106020094.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DIC78_RS19095 (DIC78_19120) | - | 3701275..3701454 (+) | 180 | WP_003236949.1 | YqzE family protein | - |
| DIC78_RS19100 (DIC78_19125) | - | 3701497..3701820 (-) | 324 | WP_024122040.1 | YqzG/YhdC family protein | - |
| DIC78_RS19105 (DIC78_19130) | tapA | 3702097..3702858 (+) | 762 | WP_106020093.1 | amyloid fiber anchoring/assembly protein TapA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40508.74 Da Isoelectric Point: 9.0197
>NTDB_id=292003 DIC78_RS19060 WP_127696768.1 3697263..3698333(+) (comGA) [Bacillus halotolerans strain ZB201702]
MDSIEKISKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQRCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
MDSIEKISKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQRCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
Nucleotide
Download Length: 1071 bp
>NTDB_id=292003 DIC78_RS19060 WP_127696768.1 3697263..3698333(+) (comGA) [Bacillus halotolerans strain ZB201702]
TTGGATTCGATAGAAAAAATAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGACTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGGATGTCAACGCTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTATCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGACCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGGCTGAAGGCTATTTTGCGCCATGACCCCGATATGATCATCTTAG
GTGAGATTAGAGACGCTGAAACAGCCCAAATTGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGCTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCGGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
TTGGATTCGATAGAAAAAATAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGACTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGGATGTCAACGCTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTATCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGACCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGGCTGAAGGCTATTTTGCGCCATGACCCCGATATGATCATCTTAG
GTGAGATTAGAGACGCTGAAACAGCCCAAATTGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGCTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCGGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
95.787 |
100 |
0.958 |
| pilB | Glaesserella parasuis strain SC1401 |
38.44 |
100 |
0.388 |