Detailed information NTG0291922

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: DIW83_RS19735
• Genome accession: NZ_CP029351
• Coordinates: 3649646..3650506 (+)
• Length: 286 a.a.
• NCBI ID: WP_016803975.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain NCTC 8102
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3644646..3655506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIW83_RS17665 (DIW83_17665)	secG	3645253..3645582 (-)	330	WP_002156913.1	preprotein translocase subunit SecG	-
DIW83_RS17670 (DIW83_17670)	tpiA	3645595..3646389 (-)	795	WP_004710827.1	triose-phosphate isomerase	-
DIW83_RS17675 (DIW83_17675)	pilB	3646680..3648392 (+)	1713	WP_016803974.1	type IV-A pilus assembly ATPase PilB	Machinery gene
DIW83_RS17680 (DIW83_17680)	pilC	3648420..3649646 (+)	1227	WP_004710832.1	type II secretion system F family protein	Machinery gene
DIW83_RS19735 (DIW83_17685)	pilD	3649646..3650506 (+)	861	WP_016803975.1	prepilin peptidase	Machinery gene
DIW83_RS17690 (DIW83_17690)	coaE	3650508..3651104 (+)	597	WP_016803976.1	dephospho-CoA kinase	-
DIW83_RS17695 (DIW83_17695)	-	3651101..3652015 (-)	915	WP_017398155.1	DMT family transporter	-
DIW83_RS17700 (DIW83_17700)	rlmB	3652051..3652800 (-)	750	WP_016803977.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
DIW83_RS17705 (DIW83_17705)	-	3652902..3653228 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
DIW83_RS17710 (DIW83_17710)	-	3653305..3654615 (-)	1311	WP_017398154.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32149.56 Da
• Isoelectric Point: 7.1786

>NTDB_id=291922 DIW83_RS19735 WP_016803975.1 3649646..3650506(+) (pilD) [Acinetobacter nosocomialis strain NCTC 8102]
MQEIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSRPASSCPACHQP
IRWYQNIPLISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLVLTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=291922 DIW83_RS19735 WP_016803975.1 3649646..3650506(+) (pilD) [Acinetobacter nosocomialis strain NCTC 8102]
ATGCAAGAAATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACACCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCCATTATTGATCATGAGAAGCTAACTTTAAGTAGGCCTGCTTCATCATGCCCTGCATGCCATCAACCC
ATCCGTTGGTATCAAAATATCCCACTCATAAGCTGGCTAGTGTTAAGAGGGAAATGTGGCCATTGCCAGCACCCGATTAG
CATTCGCTATCCAGCCATCGAACTTCTTACCATGCTATGTTCATTGGTGGTGGTTATGGTGTTTGGTCCAACCATCCAAA
TGCTTTTTGGACTGGTCCTCACATGGGTACTGATAGCACTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTACCTTTAGCTGCGCTTGGTTTAGGCATTAACACCTTTAATATCTACACCTCACCCAACTCGGCCATTTGGGG
TTACCTCATTGGTTTTCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTAATTACTGGCAAAGAAGGTATGGGCTATG
GCGACTTTAAGTTACTTGCAGCATTGGGCGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCGTCTTTA
TTGGGTGCAATCATTGGCATCATCTTATTAAAGTTAAGAAATGACAATCAGCCTTTTGCGTTTGGGCCATATATTGCCAT
TGCAGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	99.301	100	0.993
pilD	Acinetobacter baumannii D1279779	97.552	100	0.976
pilD	Vibrio cholerae strain A1552	53.676	95.105	0.51
pilD	Vibrio campbellii strain DS40M4	52.03	94.755	0.493
pilD	Neisseria gonorrhoeae MS11	47.348	92.308	0.437