Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DG474_RS08490 Genome accession   NZ_CP029257
Coordinates   1783657..1784913 (-) Length   418 a.a.
NCBI ID   WP_255778091.1    Uniprot ID   -
Organism   Streptococcus oralis strain CCUG 53468     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1778657..1789913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DG474_RS08475 (DG474_08620) - 1779849..1780262 (+) 414 WP_255778087.1 EamA family transporter -
  DG474_RS08480 (DG474_08625) - 1780301..1781680 (-) 1380 WP_255778088.1 glycoside hydrolase family 1 protein -
  DG474_RS08485 (DG474_08630) - 1781787..1783640 (-) 1854 WP_255778090.1 proline--tRNA ligase -
  DG474_RS08490 (DG474_08635) eeP 1783657..1784913 (-) 1257 WP_255778091.1 RIP metalloprotease RseP Regulator
  DG474_RS08495 (DG474_08640) - 1784929..1785732 (-) 804 WP_000159119.1 phosphatidate cytidylyltransferase -
  DG474_RS08500 (DG474_08645) - 1785741..1786499 (-) 759 WP_049520812.1 isoprenyl transferase -
  DG474_RS08505 (DG474_08650) - 1786706..1787290 (-) 585 WP_255778094.1 nucleotidyltransferase family protein -
  DG474_RS08510 (DG474_08655) ruvB 1787271..1788269 (-) 999 WP_009013571.1 Holliday junction branch migration DNA helicase RuvB -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45821.39 Da        Isoelectric Point: 5.6830

>NTDB_id=291441 DG474_RS08490 WP_255778091.1 1783657..1784913(-) (eeP) [Streptococcus oralis strain CCUG 53468]
MIGLLTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWGDDATEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFTVDHDATVVEEDGTEVRIAPLDVQY
QNASIWGKLITNFAGPMNNFILGVVVFWILIFFQGGVRDTQTNLFHVMPEGALAKVGVAETAQITKVGSHEVKNWQDLTQ
AVEADTKDKTAPTLDVTISENGSEKQVTVTPEENQGRYILGVQPVVKSDFLSMFVGGFTTAADSGLRILSALKNLIFHPD
LNKLGGPVAIFKASSDAAKNGLENVLYFLAIISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTMAGVVI
MVVLMLAVTWNDIMRLFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=291441 DG474_RS08490 WP_255778091.1 1783657..1784913(-) (eeP) [Streptococcus oralis strain CCUG 53468]
ATGATTGGATTGCTAACCTTTATCCTCGTTTTTGGGATTATTGTGGTGGTGCATGAGTTTGGACATTTTTATTTTGCCAA
GAAATCAGGCATTCTAGTTCGTGAATTTGCCATTGGTATGGGGCCCAAGATTTTTTCCCATATCGGTAAGGATGGCACTG
CTTATACCATTCGAATCCTTCCTCTAGGAGGCTATGTTCGTATGGCAGGCTGGGGTGATGATGCGACAGAGATCAAGACA
GGAACTCCGGTCAGTTTAACACTTGCTGATGATGGTAAGGTCAAACGGATCAACCTCTCAGGGAAGAAACTGGATCAAAC
GGCTCTTCCTATGCAGGTAACCCAGTTTGACTTTGAAGACAAGCTCTTTATCAAGGGCTTGGTCCTGGAAGAAGAAAAGA
CTTTTACAGTGGATCATGATGCAACGGTTGTTGAAGAAGATGGAACCGAAGTGCGCATCGCTCCTTTGGATGTACAGTAT
CAAAATGCTTCTATCTGGGGCAAGCTCATCACCAACTTTGCAGGTCCCATGAATAACTTTATCTTAGGTGTTGTTGTTTT
TTGGATCTTGATCTTTTTCCAGGGCGGTGTTAGAGATACTCAGACCAATCTCTTTCATGTCATGCCAGAGGGAGCTTTGG
CTAAGGTGGGCGTAGCTGAGACCGCTCAAATTACCAAGGTCGGCTCGCATGAGGTTAAGAATTGGCAAGACTTGACCCAG
GCTGTGGAAGCAGATACCAAGGACAAGACAGCCCCGACCTTAGATGTGACCATTTCTGAAAATGGTAGCGAAAAACAAGT
CACGGTGACTCCAGAAGAGAATCAAGGACGTTACATTCTCGGGGTTCAACCGGTAGTCAAGTCAGACTTTCTATCCATGT
TTGTTGGTGGATTTACAACTGCAGCTGACTCAGGACTTCGTATCCTTTCGGCTCTGAAAAACTTGATTTTCCATCCAGAT
TTGAACAAACTCGGTGGTCCCGTTGCCATTTTTAAGGCAAGTAGCGATGCTGCTAAAAATGGTCTTGAGAATGTCCTCTA
TTTCCTAGCTATAATTTCCATCAATATCGGGATTTTTAACTTGATTCCTATCCCGGCTTTGGATGGTGGAAAGATTGTGC
TCAATATCCTAGAGGCTATCCGCCGGAAACCCCTTAAACAAGAAATTGAAACCTATGTCACCATGGCTGGTGTAGTTATC
ATGGTTGTCTTGATGCTAGCTGTGACCTGGAATGACATTATGCGACTCTTCTTTTAG

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.81

100

0.641

  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.639


Multiple sequence alignment