Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SGO_RS09070 Genome accession   NC_009785
Coordinates   1927935..1929191 (-) Length   418 a.a.
NCBI ID   WP_172601504.1    Uniprot ID   -
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1922935..1934191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS09050 (SGO_1848) - 1924312..1924854 (+) 543 WP_012130875.1 hypothetical protein -
  SGO_RS09055 (SGO_1849) - 1924967..1925434 (+) 468 WP_012130876.1 hypothetical protein -
  SGO_RS09060 (SGO_1850) - 1925538..1925918 (-) 381 WP_012130877.1 PH domain-containing protein -
  SGO_RS09065 (SGO_1851) - 1926009..1927859 (-) 1851 WP_012130878.1 proline--tRNA ligase -
  SGO_RS09070 (SGO_1852) eeP 1927935..1929191 (-) 1257 WP_172601504.1 RIP metalloprotease RseP Regulator
  SGO_RS09075 (SGO_1853) - 1929348..1930151 (-) 804 WP_012130880.1 phosphatidate cytidylyltransferase -
  SGO_RS09080 (SGO_1854) - 1930160..1930909 (-) 750 WP_008809837.1 isoprenyl transferase -
  SGO_RS09085 (SGO_1855) yajC 1931170..1931502 (-) 333 WP_012130881.1 preprotein translocase subunit YajC -
  SGO_RS09090 (SGO_1856) - 1931674..1933788 (-) 2115 WP_012130882.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45695.19 Da        Isoelectric Point: 6.5099

>NTDB_id=29097 SGO_RS09070 WP_172601504.1 1927935..1929191(-) (eeP) [Streptococcus gordonii str. Challis substr. CH1]
MMGLLTFIIVFGIIVVVHEYGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWSDDATEIKT
GTPVSLTLNEEGKVIRVNLSGKKIDQTALPMNVTSFDFEDKLEITGLVLEESRTYSVDHDATIVEADGTEVRIAPLDVQY
QNATIWGRLITNFAGPMNNFILGIVAFWILIALQGGVQNLDTNHVQVAPNGALAQAGVKNNDQILKVGQTEISNWDDLTQ
AVEKETKDQKNPKLNLTVKSGNETKEVTVSPKKEGDRYLLGVTPGMKSDLMSMLVGGLTMAWDAAFRILNALKNLIFHPS
LNQLGGPVAIFRVSSQAAQAGLDQVISLLALLSINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKRETETYVTLAGVAI
MVVLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=29097 SGO_RS09070 WP_172601504.1 1927935..1929191(-) (eeP) [Streptococcus gordonii str. Challis substr. CH1]
ATTATGGGACTCCTCACCTTTATCATTGTTTTTGGCATTATTGTAGTGGTCCATGAGTATGGGCATTTCTACTTTGCCAA
AAAGTCAGGCATTCTCGTTCGAGAATTTGCCATTGGAATGGGACCGAAAATCTTTTCTCATATTGGAAAAGATGGAACAG
CCTATACCATTCGGATTCTGCCTCTAGGTGGCTATGTACGCATGGCTGGCTGGAGTGACGATGCAACTGAAATCAAAACT
GGAACACCTGTCAGTCTGACTCTGAATGAAGAAGGCAAGGTTATTCGAGTAAATCTATCTGGCAAGAAGATTGACCAGAC
AGCCCTGCCAATGAATGTGACAAGTTTTGATTTTGAAGATAAATTAGAAATCACTGGTTTGGTTCTTGAAGAAAGTAGAA
CCTACTCAGTTGATCACGATGCAACTATCGTTGAAGCAGATGGGACTGAAGTTCGGATTGCGCCTTTGGATGTTCAGTAC
CAAAATGCAACAATCTGGGGTCGTTTAATCACAAACTTTGCTGGCCCTATGAATAACTTTATTTTGGGTATCGTGGCTTT
TTGGATTCTAATTGCTCTGCAAGGTGGGGTTCAAAATTTGGACACAAACCATGTACAGGTTGCTCCAAACGGCGCCTTGG
CTCAAGCTGGTGTAAAAAATAACGACCAGATTCTAAAGGTTGGTCAGACAGAAATTTCAAACTGGGATGATTTGACTCAG
GCAGTTGAAAAAGAAACGAAGGATCAAAAGAATCCCAAACTTAATCTGACGGTTAAAAGCGGAAACGAGACCAAAGAAGT
AACAGTCAGTCCTAAAAAAGAAGGGGATCGTTACTTATTAGGTGTTACGCCAGGTATGAAGTCGGATCTGATGTCCATGC
TAGTAGGTGGTCTGACCATGGCTTGGGATGCGGCCTTCCGTATTTTAAATGCTTTGAAAAACTTGATTTTCCATCCTAGT
CTTAATCAACTGGGAGGACCGGTTGCTATCTTCCGTGTTAGCAGTCAAGCGGCACAAGCTGGTCTGGATCAGGTGATTAG
TCTATTGGCTCTGCTATCAATCAATATTGGTATTTTCAATTTGATTCCGATTCCAGCTCTTGACGGTGGAAAGATTGTCC
TCAACATTATTGAAGCAATTCGCAGAAAACCGCTCAAGCGCGAAACAGAGACTTATGTAACTTTAGCAGGTGTAGCGATT
ATGGTTGTGCTGATGATTGCTGTGACCTGGAATGATATTATGCGTACATTCTTTTAA

Domains


Predicted by InterproScan.

(6-404)

(205-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.048

100

0.644

  eeP Streptococcus thermophilus LMD-9

63.81

100

0.641


Multiple sequence alignment