Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DDT10_RS14790 Genome accession   NZ_CP029071
Coordinates   3015596..3017899 (-) Length   767 a.a.
NCBI ID   WP_040238945.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB79     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3010596..3022899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDT10_RS14750 (DDT10_14750) - 3011056..3011487 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  DDT10_RS14755 (DDT10_14755) - 3011487..3011828 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  DDT10_RS14760 (DDT10_14760) - 3011821..3013302 (+) 1482 WP_053574131.1 Na+/H+ antiporter subunit D -
  DDT10_RS14765 (DDT10_14765) - 3013308..3013784 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  DDT10_RS14770 (DDT10_14770) - 3013784..3014068 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  DDT10_RS14775 (DDT10_14775) mnhG 3014052..3014426 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  DDT10_RS14780 (DDT10_14780) - 3014466..3014849 (-) 384 WP_053574130.1 hotdog fold thioesterase -
  DDT10_RS14785 (DDT10_14785) comA 3014871..3015515 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  DDT10_RS14790 (DDT10_14790) comP 3015596..3017899 (-) 2304 WP_040238945.1 histidine kinase Regulator
  DDT10_RS14795 (DDT10_14795) comX 3017919..3018098 (-) 180 WP_306383677.1 competence pheromone ComX -
  DDT10_RS14800 (DDT10_14800) comQ 3018052..3019038 (-) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  DDT10_RS14805 (DDT10_14805) degQ 3019169..3019309 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  DDT10_RS14815 (DDT10_14815) - 3019772..3020113 (+) 342 WP_007408677.1 hypothetical protein -
  DDT10_RS14820 (DDT10_14820) - 3020120..3021343 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 89047.53 Da        Isoelectric Point: 8.5625

>NTDB_id=290059 DDT10_RS14790 WP_040238945.1 3015596..3017899(-) (comP) [Bacillus amyloliquefaciens strain ALB79]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=290059 DDT10_RS14790 WP_040238945.1 3015596..3017899(-) (comP) [Bacillus amyloliquefaciens strain ALB79]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGCATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCATTAATAC
ACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCTCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGA
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(567-636)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

72.987

100

0.733


Multiple sequence alignment