Detailed information NTG0289990

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: DDT09_RS17235
• Genome accession: NZ_CP029070
• Coordinates: 3486977..3488140 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain ALB69
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3481977..3493140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDT09_RS17205 (DDT09_17205)	-	3482242..3482661 (-)	420	WP_061861586.1	TIGR03826 family flagellar region protein	-
DDT09_RS17210 (DDT09_17210)	comFC	3482735..3483424 (-)	690	WP_202729384.1	phosphoribosyltransferase family protein	Machinery gene
DDT09_RS17215 (DDT09_17215)	-	3483430..3483714 (-)	285	WP_045209016.1	competence protein ComFB	-
DDT09_RS17220 (DDT09_17220)	comFA	3483772..3485157 (-)	1386	WP_061861588.1	DEAD/DEAH box helicase	Machinery gene
DDT09_RS17225 (DDT09_17225)	-	3485265..3486113 (-)	849	WP_003151387.1	DegV family protein	-
DDT09_RS17230 (DDT09_17230)	degU	3486211..3486900 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
DDT09_RS17235 (DDT09_17235)	degS	3486977..3488140 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
DDT09_RS17240 (DDT09_17240)	-	3488363..3489010 (+)	648	WP_007614107.1	YigZ family protein	-
DDT09_RS17245 (DDT09_17245)	-	3489015..3490208 (+)	1194	WP_109680545.1	LCP family protein	-
DDT09_RS17250 (DDT09_17250)	-	3490307..3491383 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
DDT09_RS17255 (DDT09_17255)	-	3491516..3492712 (-)	1197	WP_061861590.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=289990 DDT09_RS17235 WP_007407484.1 3486977..3488140(-) (degS) [Bacillus amyloliquefaciens strain ALB69]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=289990 DDT09_RS17235 WP_007407484.1 3486977..3488140(-) (degS) [Bacillus amyloliquefaciens strain ALB69]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGCCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGATAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951