Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJ12664_RS05285 | Genome accession | NZ_CP028912 |
| Coordinates | 1010367..1010669 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC 12664 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005367..1015669
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ12664_RS05260 (CJ12664_1013) | rpsR | 1005730..1005990 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJ12664_RS05265 (CJ12664_1014) | lon | 1006050..1008425 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| CJ12664_RS05270 (CJ12664_1015) | - | 1008442..1009089 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJ12664_RS05275 (CJ12664_1016) | fliW | 1009250..1009639 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJ12664_RS05280 (CJ12664_1017) | proC | 1009639..1010370 (+) | 732 | WP_108614560.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJ12664_RS05285 (CJ12664_1018) | ctsT | 1010367..1010669 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJ12664_RS05290 (CJ12664_1019) | - | 1010666..1011328 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJ12664_RS05295 (CJ12664_1020) | - | 1011325..1011777 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJ12664_RS05300 (CJ12664_1021) | hemD | 1011774..1012403 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| CJ12664_RS05305 (CJ12664_1022) | thiE | 1012381..1013013 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CJ12664_RS05310 (CJ12664_1023) | thiD | 1013003..1013815 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJ12664_RS05315 (CJ12664_1024) | - | 1013812..1014498 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJ12664_RS05320 (CJ12664_1025) | - | 1014495..1015256 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=288480 CJ12664_RS05285 WP_002853046.1 1010367..1010669(+) (ctsT) [Campylobacter jejuni strain NCTC 12664]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=288480 CJ12664_RS05285 WP_002853046.1 1010367..1010669(+) (ctsT) [Campylobacter jejuni strain NCTC 12664]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |