Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | EHC70_RS06095 | Genome accession | NZ_CP034285 |
| Coordinates | 1233065..1233709 (+) | Length | 214 a.a. |
| NCBI ID | WP_005386783.1 | Uniprot ID | Q87NC3 |
| Organism | Vibrio parahaemolyticus strain 20140624012-1 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1228065..1238709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHC70_RS06075 (EHC70_06185) | - | 1228362..1228682 (-) | 321 | WP_005465080.1 | HI1450 family dsDNA-mimic protein | - |
| EHC70_RS06080 (EHC70_06190) | yeiP | 1228685..1229251 (-) | 567 | WP_005465079.1 | elongation factor P-like protein YeiP | - |
| EHC70_RS06085 (EHC70_06195) | - | 1229438..1230205 (+) | 768 | WP_140076474.1 | nucleotidyltransferase domain-containing protein | - |
| EHC70_RS06090 (EHC70_06200) | - | 1230202..1232565 (-) | 2364 | WP_140076475.1 | DNA polymerase II | - |
| EHC70_RS06095 (EHC70_06205) | letA | 1233065..1233709 (+) | 645 | WP_005386783.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| EHC70_RS06100 (EHC70_06210) | uvrC | 1233711..1235543 (+) | 1833 | WP_079859393.1 | excinuclease ABC subunit UvrC | Machinery gene |
| EHC70_RS06105 (EHC70_06215) | pgsA | 1235590..1236147 (+) | 558 | WP_005494716.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23765.32 Da Isoelectric Point: 5.6509
>NTDB_id=288334 EHC70_RS06095 WP_005386783.1 1233065..1233709(+) (letA) [Vibrio parahaemolyticus strain 20140624012-1]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
Nucleotide
Download Length: 645 bp
>NTDB_id=288334 EHC70_RS06095 WP_005386783.1 1233065..1233709(+) (letA) [Vibrio parahaemolyticus strain 20140624012-1]
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCTGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCTGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
50.952 |
98.131 |
0.5 |
| letA | Legionella pneumophila strain ERS1305867 |
50.952 |
98.131 |
0.5 |