Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CDG57_RS01860 | Genome accession | NZ_CP028800 |
| Coordinates | 338698..339225 (+) | Length | 175 a.a. |
| NCBI ID | WP_075696027.1 | Uniprot ID | - |
| Organism | Acinetobacter junii strain WCHAJ59 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 333698..344225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG57_RS01845 (CDG57_01855) | pilM | 336259..337317 (+) | 1059 | WP_004951546.1 | pilus assembly protein PilM | Machinery gene |
| CDG57_RS01850 (CDG57_01860) | pilN | 337317..337961 (+) | 645 | WP_004909633.1 | PilN domain-containing protein | Machinery gene |
| CDG57_RS01855 (CDG57_01865) | pilO | 337958..338698 (+) | 741 | WP_075696026.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CDG57_RS01860 (CDG57_01870) | pilP | 338698..339225 (+) | 528 | WP_075696027.1 | pilus assembly protein PilP | Machinery gene |
| CDG57_RS01865 (CDG57_01875) | pilQ | 339287..341419 (+) | 2133 | WP_171488084.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| CDG57_RS01870 (CDG57_01880) | aroK | 341439..341999 (+) | 561 | WP_087539634.1 | shikimate kinase AroK | - |
| CDG57_RS01875 (CDG57_01885) | aroB | 342020..343102 (+) | 1083 | WP_087539632.1 | 3-dehydroquinate synthase | - |
| CDG57_RS01880 (CDG57_01890) | - | 343119..343997 (+) | 879 | WP_087539630.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19402.61 Da Isoelectric Point: 8.4615
>NTDB_id=287789 CDG57_RS01860 WP_075696027.1 338698..339225(+) (pilP) [Acinetobacter junii strain WCHAJ59]
MNNCKLLFSFMAGLVLVGCDSKIDAVNQKMAEIRNEPTLPIEPAPVFSPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKQ
VYPNFNRQPQPLESYALESLNMKGSMRGKTNETIALIQTPDRQIERVQVGNYLGMNQGRVVKISPTQIDLVEIVPDGRDG
YVERPRTLVLIGMAP
MNNCKLLFSFMAGLVLVGCDSKIDAVNQKMAEIRNEPTLPIEPAPVFSPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKQ
VYPNFNRQPQPLESYALESLNMKGSMRGKTNETIALIQTPDRQIERVQVGNYLGMNQGRVVKISPTQIDLVEIVPDGRDG
YVERPRTLVLIGMAP
Nucleotide
Download Length: 528 bp
>NTDB_id=287789 CDG57_RS01860 WP_075696027.1 338698..339225(+) (pilP) [Acinetobacter junii strain WCHAJ59]
ATGAATAATTGTAAATTATTGTTTAGTTTTATGGCTGGGCTTGTTTTGGTTGGATGTGATTCAAAAATTGATGCTGTAAA
CCAAAAAATGGCTGAAATTCGGAACGAACCTACTTTACCTATTGAGCCAGCACCAGTATTTAGTCCCGTACCATTATTTA
ACTATTCAGCACATCAATTGAAAAGTCCATTTATGCCAAGCTCATTGGCGGCTGAGTTGAAAATAATGGCGGGTAAACAG
GTTTATCCAAATTTCAATCGTCAACCGCAACCACTTGAAAGTTATGCGTTGGAATCCCTAAATATGAAGGGTAGCATGCG
TGGTAAAACAAATGAAACGATAGCACTGATTCAGACCCCGGACCGACAAATTGAGCGGGTGCAGGTTGGAAATTACTTAG
GAATGAATCAAGGTCGAGTGGTAAAAATTAGTCCGACTCAAATTGATTTGGTGGAAATTGTACCAGATGGGCGTGATGGT
TATGTGGAGAGACCAAGAACACTCGTTCTAATTGGTATGGCACCATAA
ATGAATAATTGTAAATTATTGTTTAGTTTTATGGCTGGGCTTGTTTTGGTTGGATGTGATTCAAAAATTGATGCTGTAAA
CCAAAAAATGGCTGAAATTCGGAACGAACCTACTTTACCTATTGAGCCAGCACCAGTATTTAGTCCCGTACCATTATTTA
ACTATTCAGCACATCAATTGAAAAGTCCATTTATGCCAAGCTCATTGGCGGCTGAGTTGAAAATAATGGCGGGTAAACAG
GTTTATCCAAATTTCAATCGTCAACCGCAACCACTTGAAAGTTATGCGTTGGAATCCCTAAATATGAAGGGTAGCATGCG
TGGTAAAACAAATGAAACGATAGCACTGATTCAGACCCCGGACCGACAAATTGAGCGGGTGCAGGTTGGAAATTACTTAG
GAATGAATCAAGGTCGAGTGGTAAAAATTAGTCCGACTCAAATTGATTTGGTGGAAATTGTACCAGATGGGCGTGATGGT
TATGTGGAGAGACCAAGAACACTCGTTCTAATTGGTATGGCACCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
78.947 |
97.714 |
0.771 |
| comL | Acinetobacter baylyi ADP1 |
69.714 |
100 |
0.697 |