Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | DBQ26_RS18295 | Genome accession | NZ_CP028574 |
| Coordinates | 3458659..3460071 (+) | Length | 470 a.a. |
| NCBI ID | WP_057089980.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain WCHAP005046 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3453659..3465071
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBQ26_RS18275 (DBQ26_18275) | thrC | 3453916..3455055 (+) | 1140 | WP_002048893.1 | threonine synthase | - |
| DBQ26_RS18280 (DBQ26_18280) | pbpG | 3455161..3456207 (-) | 1047 | WP_005804058.1 | D-alanyl-D-alanine endopeptidase PBP7/8 | - |
| DBQ26_RS18285 (DBQ26_18285) | gacA | 3456420..3457055 (+) | 636 | WP_002121174.1 | response regulator | - |
| DBQ26_RS18290 (DBQ26_18290) | pilS | 3457066..3458634 (+) | 1569 | WP_032006848.1 | sensor histidine kinase | Regulator |
| DBQ26_RS18295 (DBQ26_18295) | pilR | 3458659..3460071 (+) | 1413 | WP_057089980.1 | sigma-54-dependent transcriptional regulator | Regulator |
| DBQ26_RS18300 (DBQ26_18300) | ctpA | 3460075..3461259 (-) | 1185 | WP_032006850.1 | S41 family peptidase | - |
| DBQ26_RS18305 (DBQ26_18305) | gpmI | 3461275..3462822 (-) | 1548 | WP_017400161.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| DBQ26_RS18310 (DBQ26_18310) | lptG | 3462949..3464019 (-) | 1071 | WP_002121203.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 470 a.a. Molecular weight: 52762.86 Da Isoelectric Point: 6.4519
>NTDB_id=285604 DBQ26_RS18295 WP_057089980.1 3458659..3460071(+) (pilR) [Acinetobacter pittii strain WCHAP005046]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLMHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRERGGDILL
LANHFIQKVCTEWGISSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDEYIDLKHLAPPVRCNSVSPQIATKQVN
QTLTAQTHPKFPIEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLMHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRERGGDILL
LANHFIQKVCTEWGISSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDEYIDLKHLAPPVRCNSVSPQIATKQVN
QTLTAQTHPKFPIEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
Nucleotide
Download Length: 1413 bp
>NTDB_id=285604 DBQ26_RS18295 WP_057089980.1 3458659..3460071(+) (pilR) [Acinetobacter pittii strain WCHAP005046]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTTACTCAGTTTCATTACGATGCATGCT
TGACCGATTTAAATCTACCTGACGGTAGTGGTTTAGAATTGGTCCAACATGTTTCTCAAACTTACCCTCACACACCCATT
GCTGTTTTAACCGCATACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCTGGAGCTTTTGATTTTGTCAGTAAACC
TATTAATCAAATTCATTTAGATCAGCTATTAAAAAAAGCGCTTAACCAGCCAAAACCAGAACATGAGTTCGGTGAAACAA
CTCTAGAGAATGACTTATTAATTGGGCGCTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCACCTGTGTTTGTTACTGGTGAGTCTGGTACTGGTAAAGAAGTTGTTGCTAATCTTATGCACCGCTTAAGTAACCG
CAGTGAAGGGCCATTTATTGCAATTAACTGCGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGCAGTTTTACTGGAGCAACCCAAGACAAACAAGGTCTTATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAGGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTAGATTTTCGGGTGATTAGCGCCAGCCACCAAGATTTAGATTTGTTAGTCCAACAAGGTAAATTCC
GTCAGGACTTATTCTTCCGTATCCATGTTATGGATATCATGTTGCCACCACTGCGTGAACGTGGTGGAGATATTTTGCTC
TTAGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAATTTCAAGCAAACAATTAACAGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGATTTTCCAGGTAATGTTCGTGAATTAAGAAATATGATTGAACGAGCTATTACTTTAAGTGATGATG
AATATATTGATTTGAAACACTTGGCACCTCCTGTTAGATGCAATAGTGTTAGTCCGCAAATCGCAACTAAACAGGTAAAT
CAAACGCTAACTGCTCAAACTCATCCAAAATTTCCAATAGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGACAT
TTTACTAAATGCACTAAACATGACGCATTGGAATCGAACTTTGGCAGCTAAAAAGCTAGGAATGACATTTCGTTCTTTGC
GCTATCGACTTAAAAAATTTGGTTTAGATACCGAAATGGGAGAGGAAGTATAA
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTTACTCAGTTTCATTACGATGCATGCT
TGACCGATTTAAATCTACCTGACGGTAGTGGTTTAGAATTGGTCCAACATGTTTCTCAAACTTACCCTCACACACCCATT
GCTGTTTTAACCGCATACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCTGGAGCTTTTGATTTTGTCAGTAAACC
TATTAATCAAATTCATTTAGATCAGCTATTAAAAAAAGCGCTTAACCAGCCAAAACCAGAACATGAGTTCGGTGAAACAA
CTCTAGAGAATGACTTATTAATTGGGCGCTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCACCTGTGTTTGTTACTGGTGAGTCTGGTACTGGTAAAGAAGTTGTTGCTAATCTTATGCACCGCTTAAGTAACCG
CAGTGAAGGGCCATTTATTGCAATTAACTGCGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGCAGTTTTACTGGAGCAACCCAAGACAAACAAGGTCTTATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAGGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTAGATTTTCGGGTGATTAGCGCCAGCCACCAAGATTTAGATTTGTTAGTCCAACAAGGTAAATTCC
GTCAGGACTTATTCTTCCGTATCCATGTTATGGATATCATGTTGCCACCACTGCGTGAACGTGGTGGAGATATTTTGCTC
TTAGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAATTTCAAGCAAACAATTAACAGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGATTTTCCAGGTAATGTTCGTGAATTAAGAAATATGATTGAACGAGCTATTACTTTAAGTGATGATG
AATATATTGATTTGAAACACTTGGCACCTCCTGTTAGATGCAATAGTGTTAGTCCGCAAATCGCAACTAAACAGGTAAAT
CAAACGCTAACTGCTCAAACTCATCCAAAATTTCCAATAGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGACAT
TTTACTAAATGCACTAAACATGACGCATTGGAATCGAACTTTGGCAGCTAAAAAGCTAGGAATGACATTTCGTTCTTTGC
GCTATCGACTTAAAAAATTTGGTTTAGATACCGAAATGGGAGAGGAAGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
86.258 |
100 |
0.868 |
| pilR | Pseudomonas aeruginosa PAK |
51.198 |
97.66 |
0.5 |