Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CDG55_RS11500 Genome accession   NZ_CP028561
Coordinates   2104666..2105049 (-) Length   127 a.a.
NCBI ID   WP_004652356.1    Uniprot ID   A0A2N0WJ47
Organism   Acinetobacter sp. WCHA45     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2099666..2110049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG55_RS11485 (CDG55_11480) - 2101573..2103660 (-) 2088 WP_087535723.1 methyl-accepting chemotaxis protein -
  CDG55_RS11490 (CDG55_11485) - 2103708..2104244 (-) 537 WP_005162018.1 chemotaxis protein CheW -
  CDG55_RS11495 (CDG55_11490) - 2104284..2104646 (-) 363 WP_004664659.1 response regulator -
  CDG55_RS11500 (CDG55_11495) pilG 2104666..2105049 (-) 384 WP_004652356.1 twitching motility response regulator PilG Regulator
  CDG55_RS11505 (CDG55_11500) - 2105330..2105986 (+) 657 WP_087535722.1 hypothetical protein -
  CDG55_RS11510 (CDG55_11505) - 2106177..2107892 (+) 1716 WP_005162024.1 proline--tRNA ligase -
  CDG55_RS11515 (CDG55_11510) - 2108079..2108423 (-) 345 WP_005162025.1 zinc ribbon domain-containing protein YjdM -
  CDG55_RS11520 (CDG55_11515) - 2108475..2108832 (-) 358 Protein_1974 DUF488 domain-containing protein -
  CDG55_RS11525 (CDG55_11520) - 2108862..2109197 (-) 336 WP_087535721.1 DUF2004 domain-containing protein -
  CDG55_RS11530 (CDG55_11525) - 2109260..2109706 (-) 447 Protein_1976 SRPBCC family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14226.35 Da        Isoelectric Point: 4.7278

>NTDB_id=285519 CDG55_RS11500 WP_004652356.1 2104666..2105049(-) (pilG) [Acinetobacter sp. WCHA45]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=285519 CDG55_RS11500 WP_004652356.1 2104666..2105049(-) (pilG) [Acinetobacter sp. WCHA45]
ATGGAAGATAAATTTCAAAATTTGAAAGTAATGGTGATTGATGATTCAAAAACGATTCGTCGTACAGCTGAAACGCTTTT
ACAACGAGAAGGTTGTGAGGTGATCACCGCTGTTGATGGTTTTGAAGCATTATCAAAAATTGCAGAAGCAAATCCTGATA
TCGTGTTCGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACCTGTGCACTGATTAAAAATTCTTTAAATTACCAA
AATATCCCAGTGATTATGTTGTCAAGCAAAGACGGTTTGTTTGATCAGGCTAAAGGGCGTGTTGTGGGTTCGGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAATGCGATTCGTAATCACGTTAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N0WJ47

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

97.638

100

0.976
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment