Detailed information NTG0285518

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: CDG55_RS10370
• Genome accession: NZ_CP028561
• Coordinates: 1855987..1858413 (-)
• Length: 808 a.a.
• NCBI ID: WP_087536393.1
• Uniprot ID: A0A2R4TL28
• Organism: Acinetobacter sp. WCHA45
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1850540..1859187	1855987..1858413	within	0

Gene organization within MGE regions

Location: 1850540..1859187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG55_RS10340 (CDG55_10335)	purM	1850540..1851610 (+)	1071	WP_004661134.1	phosphoribosylformylglycinamidine cyclo-ligase	-
CDG55_RS10345 (CDG55_10340)	purN	1851607..1852236 (+)	630	WP_171063585.1	phosphoribosylglycinamide formyltransferase	-
CDG55_RS10350 (CDG55_10345)	-	1852313..1852840 (+)	528	WP_087536397.1	hypothetical protein	-
CDG55_RS10355 (CDG55_10350)	-	1852903..1853697 (-)	795	WP_087536396.1	alpha/beta hydrolase	-
CDG55_RS10360 (CDG55_10355)	sppA	1853834..1854856 (-)	1023	WP_087536395.1	signal peptide peptidase SppA	-
CDG55_RS10365 (CDG55_10360)	-	1854995..1855945 (+)	951	WP_087536394.1	lysophospholipid acyltransferase family protein	-
CDG55_RS10370 (CDG55_10365)	comA/comEC	1855987..1858413 (-)	2427	WP_087536393.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CDG55_RS10375 (CDG55_10370)	lolD	1858501..1859187 (-)	687	WP_087536392.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 808 a.a.
• Molecular weight: 92990.14 Da
• Isoelectric Point: 8.6139

>NTDB_id=285518 CDG55_RS10370 WP_087536393.1 1855987..1858413(-) (comA/comEC) [Acinetobacter sp. WCHA45]
MLKIILLGWIAGIAIMGFHLDFIELTWWIWLAIAILIFSFGIYKKESYFYRPFYKALILISASWGLFTTGYYFADSALEQ
RLQLKEFESQSYEAIVYIKNIDELSDDGHKQIAEVLNRHKQTVIWLLYLKQDKYQLNQKQSLQLGHYYRVYGQIKPVHSF
AVVGAFDQEKWFLQQNIMSAFSVQSIQPLSFDEIYRLGYQGHLKQQQSFSAKFLLSVEMKRLEFRQMLQTSKLQHKGLLL
ALLTGDESLLSNTLKQQFQQLGISHLLAISGPHVLIFAFMLSWLIQRLIQRYCPHLYLWQPRQILLLLPFLLSVLVYVAF
VGFEIPAIRTLLTALLASIFLFFRQSIRPFSLLIYSASILLLFDPFSILSAGFWLSYGACFILLRVYQTIAQLPQDQPIT
WTQKIFLAAKALVESQSKIFIALLPLVLIFFQQVSWIAPVSNLIAIPLLGGVVVPLDILAACIWLIIPALGQFLFQINDF
VLSILMSILDILQNIAPHLYGVSYTPLMMVSLILGMLILFMPRGTIPKAWALICFLPICIGVKTQPTVLNILDVGQGQAV
FLQHPEQIFMIDTGGSYNENKFSLGERVVIPFIRQQGVRHIHHVILSHLDQDHSGAFPIIQKNFEISQVQSNEYDQKMQF
KNNFSFCQQGQHWSYENLKVEILSPKSDELIHAKDQQNEYSCVVYLQFLNAQPYQNFLIMGDAGWEAEYKLMQQYPDLKV
DVLILGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQELKNRLQALHIPLLTTVEAGTIRFVFENGQVELRQQRQ
QIKWLERK

Nucleotide

• Length: 2427 bp

>NTDB_id=285518 CDG55_RS10370 WP_087536393.1 1855987..1858413(-) (comA/comEC) [Acinetobacter sp. WCHA45]
ATGTTAAAAATTATTTTATTGGGCTGGATTGCTGGTATTGCAATCATGGGATTTCATCTTGATTTTATCGAGCTGACATG
GTGGATTTGGTTGGCTATTGCAATCCTGATCTTTAGCTTTGGCATATACAAGAAAGAATCCTATTTTTATCGACCTTTTT
ATAAAGCGCTTATTTTAATCAGTGCAAGCTGGGGATTGTTTACAACAGGATATTATTTTGCAGATTCCGCATTAGAACAA
CGACTGCAATTAAAAGAGTTTGAATCACAATCATATGAAGCAATTGTTTATATTAAAAATATAGATGAATTGAGTGATGA
TGGTCATAAACAAATTGCTGAAGTACTTAATCGACATAAGCAAACAGTCATCTGGTTACTTTATTTAAAACAAGACAAAT
ATCAGTTAAATCAGAAGCAAAGTTTACAGTTGGGTCATTATTATCGAGTTTATGGTCAGATTAAACCAGTGCATAGTTTT
GCTGTTGTGGGTGCATTTGATCAGGAAAAATGGTTTTTGCAGCAAAATATAATGTCTGCATTTTCAGTGCAGTCTATTCA
ACCTTTAAGCTTTGATGAAATTTACCGTTTGGGTTATCAAGGTCACTTAAAGCAACAGCAAAGCTTTTCTGCTAAGTTTT
TATTAAGCGTTGAGATGAAACGCTTAGAATTTCGGCAGATGTTACAAACTTCTAAGCTTCAGCATAAAGGTTTACTTTTA
GCCTTGCTAACAGGTGATGAAAGCCTGTTATCCAACACATTGAAACAACAATTTCAACAGCTTGGAATTTCGCATTTGTT
AGCGATTTCTGGTCCACATGTGTTGATCTTTGCATTCATGTTGTCTTGGTTGATACAACGGCTCATACAGCGTTACTGCC
CACATCTATACTTATGGCAGCCTAGACAAATTTTATTATTATTGCCATTTTTACTCAGTGTGCTGGTCTATGTGGCATTT
GTTGGTTTTGAGATTCCAGCGATCAGAACTTTATTGACTGCTTTACTTGCAAGTATTTTTCTCTTCTTTCGTCAATCGAT
TCGCCCATTTAGCTTATTGATTTATAGTGCCAGTATATTATTGCTTTTTGATCCTTTTAGTATTCTATCCGCTGGTTTTT
GGCTGTCATATGGGGCCTGTTTTATTCTACTTAGAGTTTATCAGACCATTGCACAATTACCGCAAGATCAGCCGATTACG
TGGACTCAAAAAATATTTTTAGCTGCTAAAGCTTTGGTTGAATCGCAATCTAAGATCTTTATCGCCTTATTACCATTAGT
CTTGATTTTCTTTCAGCAAGTTTCTTGGATTGCACCTGTAAGTAACTTAATTGCAATTCCTTTACTTGGTGGTGTCGTTG
TGCCATTAGATATTCTGGCTGCATGTATTTGGCTCATCATTCCTGCATTAGGGCAGTTTTTATTTCAAATTAATGATTTT
GTATTATCTATATTGATGTCAATTTTAGACATCTTGCAAAATATTGCACCGCATTTATATGGGGTAAGTTATACACCCTT
AATGATGGTATCTTTAATCCTTGGTATGCTTATTTTATTTATGCCGAGGGGAACGATTCCTAAAGCTTGGGCATTGATTT
GTTTTTTACCTATATGTATAGGTGTAAAGACTCAACCTACGGTTTTAAATATTTTAGATGTTGGACAAGGGCAAGCTGTA
TTTTTACAACATCCCGAACAAATCTTTATGATTGATACAGGGGGCTCTTACAATGAAAATAAATTTAGTTTAGGAGAGCG
GGTTGTTATTCCATTTATACGGCAACAAGGTGTACGCCACATCCACCATGTAATCTTATCTCATCTTGATCAAGACCATA
GTGGTGCTTTTCCTATTATTCAAAAAAACTTTGAAATATCCCAAGTTCAGTCAAATGAATATGACCAAAAAATGCAGTTC
AAAAACAATTTCTCATTTTGTCAGCAAGGTCAGCATTGGTCATATGAAAATCTAAAAGTTGAAATTCTATCCCCTAAATC
AGATGAGCTTATTCATGCAAAGGATCAGCAAAATGAGTATTCCTGTGTGGTGTATTTGCAGTTTCTAAATGCCCAACCTT
ATCAAAACTTTTTAATCATGGGAGATGCAGGTTGGGAGGCTGAATATAAATTAATGCAACAATATCCCGATTTAAAAGTA
GATGTTTTGATCTTGGGACATCACGGGAGTAAACATAGTTCTGCTTATGATTTTTTAGCGACTTTAAAACCGAAACTTGC
GATTGCTTCGGCAGGGTTTGATAATCGTTATGGTCATCCCAGTCAAGAGTTGAAAAATCGTCTACAGGCGCTACACATTC
CATTATTAACTACGGTTGAAGCAGGAACAATTCGTTTTGTTTTTGAAAATGGTCAGGTTGAGCTCAGACAGCAAAGACAG
CAAATTAAATGGTTGGAAAGAAAATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-187)

• Competence protein (Competence) (242-521)

• Metallo-beta-lactamase superfamily (Lactamase_B) (553-628)

3D structure

• AlphaFold DB: A0A2R4TL28

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	57.726	100	0.578
comA/comEC	Acinetobacter baumannii strain A118	57.108	100	0.572
comA/comEC	Acinetobacter baylyi ADP1	53.457	100	0.536