Detailed information NTG0285103

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: DA379_RS14565
• Genome accession: NZ_CP028441
• Coordinates: 2930058..2931221 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 131-4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2925058..2936221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DA379_RS14535	-	2925323..2925742 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
DA379_RS14540	comFC	2925816..2926505 (-)	690	WP_198317760.1	phosphoribosyltransferase family protein	Machinery gene
DA379_RS14545	-	2926511..2926795 (-)	285	WP_003151389.1	competence protein ComFB	-
DA379_RS14550	comFA	2926853..2928238 (-)	1386	WP_003151388.1	DEAD/DEAH box helicase	Machinery gene
DA379_RS14555	-	2928346..2929194 (-)	849	WP_003151387.1	DegV family protein	-
DA379_RS14560	degU	2929292..2929981 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
DA379_RS14565	degS	2930058..2931221 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
DA379_RS14570	-	2931444..2932091 (+)	648	WP_003151384.1	YigZ family protein	-
DA379_RS14575	-	2932096..2933310 (+)	1215	WP_003151383.1	LCP family protein	-
DA379_RS14580	-	2933400..2934476 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
DA379_RS14585	-	2934609..2935805 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=285103 DA379_RS14565 WP_003151385.1 2930058..2931221(-) (degS) [Bacillus velezensis strain 131-4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=285103 DA379_RS14565 WP_003151385.1 2930058..2931221(-) (degS) [Bacillus velezensis strain 131-4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948