Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   DA377_RS05750 Genome accession   NZ_CP028439
Coordinates   1089826..1092129 (+) Length   767 a.a.
NCBI ID   WP_107890404.1    Uniprot ID   -
Organism   Bacillus velezensis strain 8-2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1084826..1097129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DA377_RS05725 - 1086382..1087602 (+) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  DA377_RS05730 - 1087609..1087950 (-) 342 WP_003152040.1 hypothetical protein -
  DA377_RS05735 degQ 1088416..1088556 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  DA377_RS05740 comQ 1088687..1089673 (+) 987 WP_269768356.1 class 1 isoprenoid biosynthesis enzyme Regulator
  DA377_RS05745 comX 1089636..1089806 (+) 171 WP_003152048.1 competence pheromone ComX Regulator
  DA377_RS05750 comP 1089826..1092129 (+) 2304 WP_107890404.1 histidine kinase Regulator
  DA377_RS05755 comA 1092210..1092854 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  DA377_RS05760 - 1092876..1093259 (+) 384 WP_003152054.1 hotdog fold thioesterase -
  DA377_RS05765 mnhG 1093299..1093673 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  DA377_RS05770 - 1093657..1093941 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  DA377_RS05775 - 1093941..1094417 (-) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  DA377_RS05780 - 1094423..1095904 (-) 1482 WP_003152061.1 Na+/H+ antiporter subunit D -
  DA377_RS05785 - 1095897..1096238 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  DA377_RS05790 - 1096238..1096669 (-) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 88985.49 Da        Isoelectric Point: 8.5618

>NTDB_id=284914 DA377_RS05750 WP_107890404.1 1089826..1092129(+) (comP) [Bacillus velezensis strain 8-2]
MKKLIKPFTISIIILSVIYVCYVAFININGLIVGTKIVENKHKVLEVAEMSKTLYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTIYAFISVFYHLYKFKYSEHAYILKVLILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=284914 DA377_RS05750 WP_107890404.1 1089826..1092129(+) (comP) [Bacillus velezensis strain 8-2]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGACTTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
TGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTATTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTATCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGGTTTTAATTTTAACAAACACGCTCTCTTTTTTGCCTTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCCTCCCTGCTCGTACTTATCCCATTGGGATTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTGTGATATTTGTTATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGTTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAAGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

72.857

100

0.731

Multiple sequence alignment