Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | A17_RS05580 | Genome accession | NZ_CP028372 |
| Coordinates | 1051762..1052064 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain huA17 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1046762..1057064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A17_RS05555 (A17_01124) | rpsR | 1047124..1047384 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| A17_RS05560 (A17_01125) | lon | 1047445..1049820 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| A17_RS05565 (A17_01126) | - | 1049837..1050484 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| A17_RS05570 (A17_01127) | fliW | 1050645..1051034 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| A17_RS05575 (A17_01128) | proC | 1051034..1051765 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| A17_RS05580 (A17_01129) | ctsT | 1051762..1052064 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| A17_RS05585 (A17_01130) | - | 1052061..1052723 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| A17_RS05590 (A17_01131) | - | 1052720..1053172 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| A17_RS05595 (A17_01132) | hemD | 1053169..1053798 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| A17_RS05600 (A17_01133) | thiE | 1053776..1054408 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| A17_RS05605 (A17_01134) | thiD | 1054398..1055210 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A17_RS05610 (A17_01135) | - | 1055207..1055893 (-) | 687 | WP_126655061.1 | endonuclease III domain-containing protein | - |
| A17_RS05615 (A17_01136) | - | 1055890..1056651 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=284387 A17_RS05580 WP_002853046.1 1051762..1052064(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain huA17]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=284387 A17_RS05580 WP_002853046.1 1051762..1052064(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain huA17]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |