Detailed information NTG0284125

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CEP77_RS03080
• Genome accession: NZ_CP028325
• Coordinates: 629941..630741 (-)
• Length: 266 a.a.
• NCBI ID: WP_108169258.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain FDAARGOS_298
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 624941..635741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP77_RS03050 (CEP77_03045)	recJ	625084..626634 (+)	1551	WP_108169252.1	single-stranded-DNA-specific exonuclease RecJ	-
CEP77_RS03055 (CEP77_03050)	-	626634..627515 (+)	882	WP_108169253.1	RluA family pseudouridine synthase	-
CEP77_RS03060 (CEP77_03055)	-	627618..628178 (-)	561	WP_108169254.1	hypothetical protein	-
CEP77_RS03065 (CEP77_03060)	-	628162..628500 (-)	339	WP_108169255.1	hypothetical protein	-
CEP77_RS03070 (CEP77_03065)	-	628628..629410 (-)	783	WP_108169256.1	tetratricopeptide repeat protein	-
CEP77_RS03075 (CEP77_03070)	dprB	629540..629944 (-)	405	WP_108169257.1	Holliday junction resolvase RuvX	Machinery gene
CEP77_RS03080 (CEP77_03075)	dprA	629941..630741 (-)	801	WP_108169258.1	DNA-processing protein DprA	Machinery gene
CEP77_RS03085 (CEP77_03080)	minE	630753..630986 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
CEP77_RS03090 (CEP77_03085)	minD	630983..631789 (-)	807	WP_108169259.1	septum site-determining protein MinD	-
CEP77_RS03095 (CEP77_03090)	ilvC	631813..632805 (-)	993	WP_108169260.1	ketol-acid reductoisomerase	-
CEP77_RS03105 (CEP77_03100)	-	633054..633836 (+)	783	WP_108169261.1	NAD+ synthase	-
CEP77_RS03110 (CEP77_03105)	-	633833..634771 (+)	939	WP_108169262.1	tetraacyldisaccharide 4'-kinase	-
CEP77_RS03115 (CEP77_03110)	pseH	634704..635246 (-)	543	WP_108169263.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29787.67 Da
• Isoelectric Point: 8.5826

>NTDB_id=284125 CEP77_RS03080 WP_108169258.1 629941..630741(-) (dprA) [Helicobacter pylori strain FDAARGOS_298]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTITLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=284125 CEP77_RS03080 WP_108169258.1 629941..630741(-) (dprA) [Helicobacter pylori strain FDAARGOS_298]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCACGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACTCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCCAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414