Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C7M30_RS21920 Genome accession   NZ_CP028218
Coordinates   1683616..1683756 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain SRCM102756     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678616..1688756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS21915 - 1682498..1683670 (-) 1173 Protein_1720 condensation domain-containing protein -
  C7M30_RS21920 comS 1683616..1683756 (-) 141 WP_010886404.1 competence protein ComS Regulator
  C7M30_RS21925 srfAB 1683848..1686892 (-) 3045 Protein_1722 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=283471 C7M30_RS21920 WP_010886404.1 1683616..1683756(-) (comS) [Bacillus subtilis strain SRCM102756]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283471 C7M30_RS21920 WP_010886404.1 1683616..1683756(-) (comS) [Bacillus subtilis strain SRCM102756]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment