Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C7M30_RS19200 | Genome accession | NZ_CP028218 |
| Coordinates | 3712685..3713020 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM102756 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3707685..3718020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M30_RS19150 (C7M30_03799) | comGC | 3707704..3708000 (+) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| C7M30_RS19155 (C7M30_03800) | comGD | 3707990..3708421 (+) | 432 | WP_160244872.1 | comG operon protein ComGD | Machinery gene |
| C7M30_RS19160 (C7M30_03801) | comGE | 3708405..3708752 (+) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| C7M30_RS19165 | comGF | 3708778..3709161 (+) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| C7M30_RS19170 (C7M30_03803) | comGG | 3709162..3709536 (+) | 375 | WP_021480019.1 | ComG operon protein ComGG | Machinery gene |
| C7M30_RS19175 (C7M30_03804) | spoIITA | 3709608..3709787 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| C7M30_RS19180 (C7M30_03805) | yqzG | 3709829..3710155 (-) | 327 | WP_160244873.1 | YqzG/YhdC family protein | - |
| C7M30_RS19185 (C7M30_03806) | tapA | 3710427..3711188 (+) | 762 | WP_160244874.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M30_RS19190 (C7M30_03807) | sipW | 3711172..3711744 (+) | 573 | WP_160245036.1 | signal peptidase I SipW | - |
| C7M30_RS19195 (C7M30_03808) | tasA | 3711808..3712593 (+) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C7M30_RS19200 (C7M30_03809) | sinR | 3712685..3713020 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C7M30_RS19205 (C7M30_03810) | sinI | 3713054..3713227 (-) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| C7M30_RS19210 (C7M30_03811) | yqhG | 3713411..3714205 (-) | 795 | WP_160244875.1 | YqhG family protein | - |
| C7M30_RS19215 (C7M30_03812) | hepAA | 3714226..3715899 (-) | 1674 | WP_160244876.1 | SNF2-related protein | - |
| C7M30_RS19220 (C7M30_03813) | gcvT | 3716341..3717429 (+) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=283465 C7M30_RS19200 WP_003226345.1 3712685..3713020(-) (sinR) [Bacillus subtilis strain SRCM102756]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=283465 C7M30_RS19200 WP_003226345.1 3712685..3713020(-) (sinR) [Bacillus subtilis strain SRCM102756]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |