Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M30_RS15630 Genome accession   NZ_CP028218
Coordinates   3048140..3049039 (+) Length   299 a.a.
NCBI ID   WP_038828674.1    Uniprot ID   C0JBL1
Organism   Bacillus subtilis strain SRCM102756     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3043140..3054039
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS15600 (C7M30_03098) pncA 3043605..3044156 (+) 552 WP_015714627.1 isochorismatase family cysteine hydrolase -
  C7M30_RS15605 (C7M30_03099) pncB 3044172..3045644 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M30_RS15610 (C7M30_03100) pdeH 3045781..3047010 (+) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  C7M30_RS15615 (C7M30_03101) - 3046986..3047354 (-) 369 WP_144500544.1 hypothetical protein -
  C7M30_RS15620 - 3047468..3047593 (-) 126 WP_154796978.1 hypothetical protein -
  C7M30_RS15625 (C7M30_03102) degQ 3047815..3047955 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M30_RS15630 (C7M30_03103) comQ 3048140..3049039 (+) 900 WP_038828674.1 class 1 isoprenoid biosynthesis enzyme Regulator
  C7M30_RS15635 (C7M30_03104) comX 3049027..3049194 (+) 168 WP_038828676.1 competence pheromone ComX Regulator
  C7M30_RS15640 (C7M30_03105) comP 3049209..3051518 (+) 2310 WP_038828679.1 two-component system sensor histidine kinase ComP Regulator
  C7M30_RS15645 (C7M30_03106) comA 3051599..3052243 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M30_RS15650 (C7M30_03107) yuxO 3052262..3052642 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M30_RS15655 (C7M30_03108) mnhG 3052681..3053055 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  C7M30_RS15660 (C7M30_03109) mrpF 3053039..3053323 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M30_RS15665 (C7M30_03110) mrpE 3053323..3053799 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34209.15 Da        Isoelectric Point: 5.1221

>NTDB_id=283441 C7M30_RS15630 WP_038828674.1 3048140..3049039(+) (comQ) [Bacillus subtilis strain SRCM102756]
MKEIVKQNISNKDLSQLLCSFIDSKETFSFAESAILHYVVFGGENLDVATWLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNINPLIFKYVLRYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIVAQISGDYHVLLSGNRSDIEKNKQTLIYLYLKRLFNNASEELLYLFSHKDLYYKALLDRE
KFEEKLIQAGVTQYISVLLEIYKQKCFSTIEQLNLDKEKKELIKESLLSYKKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=283441 C7M30_RS15630 WP_038828674.1 3048140..3049039(+) (comQ) [Bacillus subtilis strain SRCM102756]
ATGAAGGAGATTGTGAAGCAAAACATATCTAACAAAGATTTGTCACAACTTCTTTGCTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCTGCAATCTTACATTATGTTGTTTTTGGAGGAGAGAATTTAGATGTTGCAACATGGCTTGGTG
CGGGAATAGAAATACTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCTTTATGGATG
AAAATTAATCGCTCAGAGTCTTTAAATGCAGCTCTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAT
CAATCCTTTAATTTTTAAATATGTTTTAAGATACGTAAACGAAGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTTTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTATTATAAAGGGATTGTAGCTCAAATTTCTGGAGA
TTATCATGTTCTTTTATCTGGGAATCGCAGTGATATTGAAAAAAACAAACAAACACTGATTTACTTATATCTTAAGCGAT
TGTTTAATAATGCTTCGGAAGAATTATTATATTTATTTTCACATAAAGACTTATATTATAAAGCATTATTAGATAGGGAG
AAATTCGAAGAAAAATTAATTCAGGCAGGAGTTACTCAATACATTTCGGTATTATTGGAGATATACAAACAAAAATGTTT
TTCTACTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGTTAATAAAGGAAAGCTTACTAAGTTATAAAAAGGGGG
ATACAAGGTGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C0JBL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

92.642

100

0.926


Multiple sequence alignment