Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M29_RS19630 Genome accession   NZ_CP028217
Coordinates   3820981..3821172 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102751     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3815981..3826172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS19605 (C7M29_03860) appD 3816306..3817292 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M29_RS19610 (C7M29_03861) yjaZ 3817484..3818269 (-) 786 WP_017695678.1 DUF2268 domain-containing protein -
  C7M29_RS19615 (C7M29_03862) fabF 3818345..3819586 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M29_RS19620 (C7M29_03863) fabH 3819609..3820547 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M29_RS19625 (C7M29_03864) yjzB 3820712..3820951 (+) 240 WP_003232972.1 spore coat protein YjzB -
  C7M29_RS19630 (C7M29_03865) comZ 3820981..3821172 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M29_RS19635 (C7M29_03866) med 3821187..3822140 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C7M29_RS19640 (C7M29_03867) - 3822230..3822787 (-) 558 WP_015252365.1 hypothetical protein -
  C7M29_RS19645 (C7M29_03868) - 3822869..3823603 (-) 735 WP_014479433.1 hypothetical protein -
  C7M29_RS19650 (C7M29_03869) yjzD 3823854..3824039 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C7M29_RS19655 (C7M29_03870) yjzC 3824085..3824264 (-) 180 WP_003245356.1 YjzC family protein -
  C7M29_RS19660 (C7M29_03871) argF 3824350..3825309 (-) 960 WP_161477072.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=283379 C7M29_RS19630 WP_003224559.1 3820981..3821172(-) (comZ) [Bacillus subtilis strain SRCM102751]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=283379 C7M29_RS19630 WP_003224559.1 3820981..3821172(-) (comZ) [Bacillus subtilis strain SRCM102751]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment