Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M29_RS06835 Genome accession   NZ_CP028217
Coordinates   1321493..1321612 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102751     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1316493..1326612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS06815 (C7M29_01347) pbpG 1316856..1318931 (-) 2076 WP_029726084.1 transglycosylase domain-containing protein -
  C7M29_RS06820 (C7M29_01348) speE 1319133..1319963 (+) 831 WP_003227543.1 spermidine synthase -
  C7M29_RS06825 (C7M29_01349) speB 1320024..1320896 (+) 873 WP_003227545.1 agmatinase -
  C7M29_RS06830 (C7M29_01350) - 1320928..1321378 (-) 451 Protein_1284 YbaK/EbsC family protein -
  C7M29_RS06835 (C7M29_01351) phrF 1321493..1321612 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M29_RS06840 (C7M29_01352) rapF 1321596..1322741 (-) 1146 WP_161476632.1 response regulator aspartate phosphatase RapF Regulator
  C7M29_RS21110 - 1322744..1322974 (+) 231 WP_041334639.1 hypothetical protein -
  C7M29_RS06850 (C7M29_01353) ywhK 1322971..1324326 (+) 1356 WP_046381402.1 YncE family protein -
  C7M29_RS06855 (C7M29_01354) ywhL 1324366..1325742 (+) 1377 WP_161476633.1 YncE family protein -
  C7M29_RS06860 (C7M29_01355) albG 1325748..1326449 (-) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=283326 C7M29_RS06835 WP_009968329.1 1321493..1321612(-) (phrF) [Bacillus subtilis strain SRCM102751]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=283326 C7M29_RS06835 WP_009968329.1 1321493..1321612(-) (phrF) [Bacillus subtilis strain SRCM102751]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment