Detailed information NTG0283327

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M29_RS06840
• Genome accession: NZ_CP028217
• Coordinates: 1321596..1322741 (-)
• Length: 381 a.a.
• NCBI ID: WP_161476632.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102751
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1316596..1327741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M29_RS06815 (C7M29_01347)	pbpG	1316856..1318931 (-)	2076	WP_029726084.1	transglycosylase domain-containing protein	-
C7M29_RS06820 (C7M29_01348)	speE	1319133..1319963 (+)	831	WP_003227543.1	spermidine synthase	-
C7M29_RS06825 (C7M29_01349)	speB	1320024..1320896 (+)	873	WP_003227545.1	agmatinase	-
C7M29_RS06830 (C7M29_01350)	-	1320928..1321378 (-)	451	Protein_1284	YbaK/EbsC family protein	-
C7M29_RS06835 (C7M29_01351)	phrF	1321493..1321612 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
C7M29_RS06840 (C7M29_01352)	rapF	1321596..1322741 (-)	1146	WP_161476632.1	response regulator aspartate phosphatase RapF	Regulator
C7M29_RS21110	-	1322744..1322974 (+)	231	WP_041334639.1	hypothetical protein	-
C7M29_RS06850 (C7M29_01353)	ywhK	1322971..1324326 (+)	1356	WP_046381402.1	YncE family protein	-
C7M29_RS06855 (C7M29_01354)	ywhL	1324366..1325742 (+)	1377	WP_161476633.1	YncE family protein	-
C7M29_RS06860 (C7M29_01355)	albG	1325748..1326449 (-)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C7M29_RS06865 (C7M29_01356)	albF	1326446..1327726 (-)	1281	WP_032722698.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45593.11 Da
• Isoelectric Point: 5.2554

>NTDB_id=283327 C7M29_RS06840 WP_161476632.1 1321596..1322741(-) (rapF) [Bacillus subtilis strain SRCM102751]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAKAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=283327 C7M29_RS06840 WP_161476632.1 1321596..1322741(-) (rapF) [Bacillus subtilis strain SRCM102751]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAAAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATACCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572