Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M27_RS20970 Genome accession   NZ_CP028213
Coordinates   4050274..4050393 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102749     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 4045274..4055393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS20940 (C7M27_04140) - 4045936..4046496 (-) 561 WP_128740811.1 hypothetical protein -
  C7M27_RS20945 (C7M27_04141) - 4046489..4047136 (-) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  C7M27_RS20950 (C7M27_04142) - 4047139..4047930 (-) 792 WP_250635645.1 hypothetical protein -
  C7M27_RS20955 (C7M27_04143) - 4047946..4048620 (-) 675 WP_021480844.1 hypothetical protein -
  C7M27_RS20960 (C7M27_04144) - 4048607..4049395 (-) 789 WP_015714893.1 membrane protein -
  C7M27_RS20965 (C7M27_04145) - 4049544..4050023 (-) 480 WP_015714892.1 hypothetical protein -
  C7M27_RS20970 (C7M27_04146) phrF 4050274..4050393 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M27_RS20975 (C7M27_04147) rapF 4050377..4051522 (-) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  C7M27_RS22240 - 4051525..4051755 (+) 231 Protein_4116 hypothetical protein -
  C7M27_RS20985 (C7M27_04148) ywhK 4051752..4053107 (+) 1356 WP_015250986.1 YncE family protein -
  C7M27_RS20990 (C7M27_04149) ywhL 4053146..4054522 (+) 1377 WP_128740810.1 YncE family protein -
  C7M27_RS20995 (C7M27_04150) albG 4054528..4055229 (-) 702 WP_128740809.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=283220 C7M27_RS20970 WP_009968329.1 4050274..4050393(-) (phrF) [Bacillus subtilis strain SRCM102749]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=283220 C7M27_RS20970 WP_009968329.1 4050274..4050393(-) (phrF) [Bacillus subtilis strain SRCM102749]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment