Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M26_RS16205 Genome accession   NZ_CP028212
Coordinates   3089877..3089996 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102748     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3084877..3094996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS16185 (C7M26_03188) pbpG 3085241..3087316 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  C7M26_RS16190 (C7M26_03189) speE 3087518..3088348 (+) 831 WP_003227543.1 spermidine synthase -
  C7M26_RS16195 (C7M26_03190) speB 3088409..3089281 (+) 873 WP_032722706.1 agmatinase -
  C7M26_RS16200 - 3089313..3089763 (-) 451 Protein_3178 YbaK/EbsC family protein -
  C7M26_RS16205 (C7M26_03191) phrF 3089877..3089996 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M26_RS16210 (C7M26_03192) rapF 3089980..3091125 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  C7M26_RS22340 - 3091128..3091358 (+) 231 WP_009968328.1 hypothetical protein -
  C7M26_RS16220 (C7M26_03193) ywhK 3091355..3092710 (+) 1356 WP_032722703.1 YncE family protein -
  C7M26_RS16225 (C7M26_03194) ywhL 3092749..3094125 (+) 1377 WP_032722701.1 YncE family protein -
  C7M26_RS16230 (C7M26_03195) albG 3094131..3094832 (-) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=283124 C7M26_RS16205 WP_009968329.1 3089877..3089996(-) (phrF) [Bacillus subtilis strain SRCM102748]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=283124 C7M26_RS16205 WP_009968329.1 3089877..3089996(-) (phrF) [Bacillus subtilis strain SRCM102748]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment