Detailed information NTG0283125

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M26_RS16210
• Genome accession: NZ_CP028212
• Coordinates: 3089980..3091125 (-)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102748
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3084980..3096125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M26_RS16185 (C7M26_03188)	pbpG	3085241..3087316 (-)	2076	WP_003227540.1	transglycosylase domain-containing protein	-
C7M26_RS16190 (C7M26_03189)	speE	3087518..3088348 (+)	831	WP_003227543.1	spermidine synthase	-
C7M26_RS16195 (C7M26_03190)	speB	3088409..3089281 (+)	873	WP_032722706.1	agmatinase	-
C7M26_RS16200	-	3089313..3089763 (-)	451	Protein_3178	YbaK/EbsC family protein	-
C7M26_RS16205 (C7M26_03191)	phrF	3089877..3089996 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
C7M26_RS16210 (C7M26_03192)	rapF	3089980..3091125 (-)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
C7M26_RS22340	-	3091128..3091358 (+)	231	WP_009968328.1	hypothetical protein	-
C7M26_RS16220 (C7M26_03193)	ywhK	3091355..3092710 (+)	1356	WP_032722703.1	YncE family protein	-
C7M26_RS16225 (C7M26_03194)	ywhL	3092749..3094125 (+)	1377	WP_032722701.1	YncE family protein	-
C7M26_RS16230 (C7M26_03195)	albG	3094131..3094832 (-)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C7M26_RS16235 (C7M26_03196)	albF	3094829..3096109 (-)	1281	WP_032722698.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=283125 C7M26_RS16210 WP_003227549.1 3089980..3091125(-) (rapF) [Bacillus subtilis strain SRCM102748]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=283125 C7M26_RS16210 WP_003227549.1 3089980..3091125(-) (rapF) [Bacillus subtilis strain SRCM102748]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572