Detailed information NTG0283039

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: EB817_RS00340
• Genome accession: NZ_CP033336
• Coordinates: 54307..55305 (+)
• Length: 332 a.a.
• NCBI ID: WP_014407198.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY165
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 49307..60305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EB817_RS00325 (EB817_00325)	-	50038..51735 (+)	1698	WP_129304353.1	AIPR family protein	-
EB817_RS00330 (EB817_00330)	purB	51753..53045 (+)	1293	WP_129304355.1	adenylosuccinate lyase	-
EB817_RS00335 (EB817_00335)	comR	53176..54087 (+)	912	WP_011888526.1	XRE family transcriptional regulator	Regulator
EB817_RS09375	comS	54178..54276 (+)	99	WP_020833188.1	quorum-sensing system DWW-type pheromone	Regulator
EB817_RS00340 (EB817_00340)	ruvB	54307..55305 (+)	999	WP_014407198.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
EB817_RS00345 (EB817_00345)	-	55443..55880 (+)	438	WP_002994668.1	low molecular weight phosphotyrosine protein phosphatase	-
EB817_RS00350 (EB817_00350)	-	55903..56304 (+)	402	WP_012560369.1	MORN repeat-containing protein	-
EB817_RS00355 (EB817_00355)	-	56301..58076 (+)	1776	WP_129304357.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37581.11 Da
• Isoelectric Point: 5.3005

>NTDB_id=283039 EB817_RS00340 WP_014407198.1 54307..55305(+) (ruvB) [Streptococcus pyogenes strain TSPY165]
MARILDNNVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIIT
SQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEPYLIQKGFLMRTRTGRVATQK
AYRHLGYPYQNT

Nucleotide

• Length: 999 bp

>NTDB_id=283039 EB817_RS00340 WP_014407198.1 54307..55305(+) (ruvB) [Streptococcus pyogenes strain TSPY165]
ATGGCTAGAATTTTAGACAATAATGTAATGGGAAATGAGGAGTTTTCGGATCGGACTCTTCGCCCTCAATATCTACACGA
ATATATTGGACAAGATAAAGTTAAGGAACAATTCGCTATTTTTATAGAAGCAGCTAAAAGACGTGACGAATCTTTAGACC
ATGTTTTATTATTTGGACCTCCAGGACTGGGAAAAACAACAATGGCATTTGTGATTGCCAATGAATTGGGAGTTAATTTA
AAGCAAACTTCAGGTCCTGCCGTTGAGAAAGCTGGAGATTTAGTAGCTATTTTAAATGAATTAGAACCAGGGGATATTTT
GTTTATTGATGAAATTCACCGCATGCCAATGTCTGTCGAGGAAGTACTATATAGTGCTATGGAAGACTTCTATATTGATA
TTATGATTGGCGCTGGAGATACTAGTCGTAGTATTCATTTGGATCTGCCTCCATTTACATTGATTGGTGCTACTACACGT
GCAGGCATGTTATCTAATCCCCTCAGAGCTCGTTTTGGTATCACTGGTCACATGGAATACTATCAAGAAAAGGATTTGAC
AGAGATTGTGGAGCGTACAGCTACTATTTTTGAAATAAAAATAGACCATGAAGCTGCACGGAAATTAGCTTGTCGCAGTA
GAGGAACGCCCCGCATTGCTAATCGATTACTAAAACGAGTGCGTGACTATGCTCAAATTATTGGTGATGGCATCATAACG
TCTCAAATAACTGATAGAGCTTTGACTATGTTAGATGTTGACCGCGAAGGTCTCGATTACATTGATCAGAAAATTTTACG
AACGATGATTGAGATGTATCAGGGAGGACCAGTTGGTTTGGGGACATTATCTGTGAATATTGCCGAGGAGCGTAATACAG
TTGAAGAGATGTATGAACCCTACTTAATTCAAAAAGGCTTTCTCATGCGAACACGAACAGGTCGTGTAGCGACGCAAAAG
GCTTATCGTCATCTTGGCTATCCCTATCAAAACACTTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae D39	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae TIGR4	84.545	99.398	0.84
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.824	97.289	0.572
ruvB	Helicobacter pylori 26695	48.936	99.096	0.485
ruvB	Synechocystis sp. PCC 6803	50.16	94.277	0.473