Detailed information NTG0282996

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M25_RS02645
• Genome accession: NZ_CP028211
• Coordinates: 509201..510349 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102747
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 504201..515349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M25_RS02615 (C7M25_00526)	-	504338..505096 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
C7M25_RS02620 (C7M25_00527)	-	505090..506037 (-)	948	WP_160222847.1	iron chelate uptake ABC transporter family permease subunit	-
C7M25_RS02625 (C7M25_00528)	ceuB	506027..506980 (-)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M25_RS02630 (C7M25_00529)	-	507395..508759 (+)	1365	WP_059366589.1	aspartate kinase	-
C7M25_RS02635	-	508839..508949 (+)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M25_RS02640 (C7M25_00531)	phrC	509098..509217 (-)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M25_RS02645 (C7M25_00532)	rapC	509201..510349 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M25_RS02650 (C7M25_00533)	-	510502..511935 (-)	1434	WP_162992601.1	sensor histidine kinase	-
C7M25_RS02655 (C7M25_00534)	-	511922..512605 (-)	684	WP_007410267.1	response regulator transcription factor	-
C7M25_RS02660 (C7M25_00535)	-	512818..514254 (+)	1437	WP_160222846.1	ABC transporter permease	-
C7M25_RS02665 (C7M25_00536)	-	514269..514952 (+)	684	WP_025284225.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282996 C7M25_RS02645 WP_007410270.1 509201..510349(-) (rapC) [Bacillus velezensis strain SRCM102747]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282996 C7M25_RS02645 WP_007410270.1 509201..510349(-) (rapC) [Bacillus velezensis strain SRCM102747]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568