Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C7M25_RS02625 Genome accession   NZ_CP028211
Coordinates   506027..506980 (-) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102747     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 501027..511980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M25_RS02605 (C7M25_00524) - 501906..503330 (+) 1425 WP_025284231.1 MDR family MFS transporter -
  C7M25_RS02610 (C7M25_00525) - 503372..504316 (-) 945 WP_095352402.1 siderophore ABC transporter substrate-binding protein -
  C7M25_RS02615 (C7M25_00526) - 504338..505096 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  C7M25_RS02620 (C7M25_00527) - 505090..506037 (-) 948 WP_160222847.1 iron chelate uptake ABC transporter family permease subunit -
  C7M25_RS02625 (C7M25_00528) ceuB 506027..506980 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  C7M25_RS02630 (C7M25_00529) - 507395..508759 (+) 1365 WP_059366589.1 aspartate kinase -
  C7M25_RS02635 - 508839..508949 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  C7M25_RS02640 (C7M25_00531) phrC 509098..509217 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C7M25_RS02645 (C7M25_00532) rapC 509201..510349 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  C7M25_RS02650 (C7M25_00533) - 510502..511935 (-) 1434 WP_162992601.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=282994 C7M25_RS02625 WP_059366593.1 506027..506980(-) (ceuB) [Bacillus velezensis strain SRCM102747]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=282994 C7M25_RS02625 WP_059366593.1 506027..506980(-) (ceuB) [Bacillus velezensis strain SRCM102747]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment