Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   C7M25_RS02640 Genome accession   NZ_CP028211
Coordinates   509098..509217 (-) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102747     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 504098..514217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M25_RS02615 (C7M25_00526) - 504338..505096 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  C7M25_RS02620 (C7M25_00527) - 505090..506037 (-) 948 WP_160222847.1 iron chelate uptake ABC transporter family permease subunit -
  C7M25_RS02625 (C7M25_00528) ceuB 506027..506980 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  C7M25_RS02630 (C7M25_00529) - 507395..508759 (+) 1365 WP_059366589.1 aspartate kinase -
  C7M25_RS02635 - 508839..508949 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  C7M25_RS02640 (C7M25_00531) phrC 509098..509217 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C7M25_RS02645 (C7M25_00532) rapC 509201..510349 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  C7M25_RS02650 (C7M25_00533) - 510502..511935 (-) 1434 WP_162992601.1 sensor histidine kinase -
  C7M25_RS02655 (C7M25_00534) - 511922..512605 (-) 684 WP_007410267.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=282995 C7M25_RS02640 WP_033575081.1 509098..509217(-) (phrC) [Bacillus velezensis strain SRCM102747]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282995 C7M25_RS02640 WP_033575081.1 509098..509217(-) (phrC) [Bacillus velezensis strain SRCM102747]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744

Multiple sequence alignment