Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   C7M24_RS13570 Genome accession   NZ_CP028210
Coordinates   2802784..2803536 (-) Length   250 a.a.
NCBI ID   WP_012118107.1    Uniprot ID   A7Z796
Organism   Bacillus velezensis strain SRCM102746     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2797784..2808536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M24_RS13545 (C7M24_02723) mreC 2798220..2799083 (-) 864 WP_007408166.1 rod shape-determining protein MreC -
  C7M24_RS13550 (C7M24_02724) mreB 2799114..2800127 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  C7M24_RS13555 (C7M24_02725) radC 2800219..2800914 (-) 696 WP_007408165.1 RadC family protein -
  C7M24_RS13560 (C7M24_02726) - 2800946..2801515 (-) 570 WP_007408164.1 Maf family protein -
  C7M24_RS13565 (C7M24_02727) - 2801656..2802657 (-) 1002 WP_160223199.1 SPOR domain-containing protein -
  C7M24_RS13570 (C7M24_02728) comC 2802784..2803536 (-) 753 WP_012118107.1 prepilin peptidase Machinery gene
  C7M24_RS13575 (C7M24_02729) - 2803676..2804968 (-) 1293 WP_160223200.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  C7M24_RS13580 (C7M24_02730) - 2805027..2807669 (-) 2643 WP_044801613.1 valine--tRNA ligase -
  C7M24_RS13585 (C7M24_02731) - 2808122..2808313 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27219.94 Da        Isoelectric Point: 9.4293

>NTDB_id=282973 C7M24_RS13570 WP_012118107.1 2802784..2803536(-) (comC) [Bacillus velezensis strain SRCM102746]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCRLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLDSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGRLGKKQPFPFAPAISAGSALSYLYGEELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=282973 C7M24_RS13570 WP_012118107.1 2802784..2803536(-) (comC) [Bacillus velezensis strain SRCM102746]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTGATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTGCGAAT
CTCGGTTATTTCGCCGCGTTCAGCCTGTTCGTTTTGCCGCTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTTTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCAAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCG
TGTTTATTCACGGCTGCAGGCATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTGCTCAT
GATTGTTACTATGACGGATCTGCAATATATGCTGATTCCTGACAAGGTTCTGCTGTTTTTTCTTCCGCTTTTCATCGCCG
GCCGTATGTTTTCTCCGCTGGATTCATGGTATGCAGGGTTTGCCGGAGCCGTTTGCGGATTTTTTCTGCTTGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGCCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCCGTATACGGTATGTGCGCCGCAGCCCGGGGCAGGCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGAAGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGAGGGGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z796

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

58.871

99.2

0.584

Multiple sequence alignment