Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | D9Y32_RS19250 | Genome accession | NZ_CP033218 |
| Coordinates | 3711009..3712115 (-) | Length | 368 a.a. |
| NCBI ID | WP_009328417.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain TCCC 11148 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3706009..3717115
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9Y32_RS19225 (D9Y32_19250) | - | 3707999..3709087 (+) | 1089 | WP_142782681.1 | N-acetylmuramoyl-L-alanine amidase | - |
| D9Y32_RS19230 (D9Y32_19255) | - | 3709219..3709605 (+) | 387 | WP_021837858.1 | hypothetical protein | - |
| D9Y32_RS19235 (D9Y32_19260) | - | 3709624..3709878 (+) | 255 | WP_009328416.1 | phage holin | - |
| D9Y32_RS19240 (D9Y32_19265) | - | 3709897..3710196 (+) | 300 | WP_034291560.1 | hypothetical protein | - |
| D9Y32_RS23775 (D9Y32_19270) | - | 3710404..3710481 (+) | 78 | WP_003180750.1 | putative holin-like toxin | - |
| D9Y32_RS23780 | - | 3710884..3711012 (-) | 129 | WP_256692922.1 | hypothetical protein | - |
| D9Y32_RS19250 (D9Y32_19275) | rapC | 3711009..3712115 (-) | 1107 | WP_009328417.1 | tetratricopeptide repeat protein | Regulator |
| D9Y32_RS19255 (D9Y32_19280) | - | 3712226..3713485 (-) | 1260 | WP_009328418.1 | MFS transporter | - |
| D9Y32_RS19260 (D9Y32_19285) | - | 3713627..3713980 (-) | 354 | WP_009328419.1 | hypothetical protein | - |
| D9Y32_RS19265 (D9Y32_19290) | rok | 3714050..3714532 (-) | 483 | WP_009328420.1 | hypothetical protein | Regulator |
| D9Y32_RS19275 (D9Y32_19300) | - | 3714818..3715276 (-) | 459 | WP_009328421.1 | SMI1/KNR4 family protein | - |
| D9Y32_RS19280 (D9Y32_19305) | - | 3715317..3715739 (-) | 423 | WP_009328422.1 | SMI1/KNR4 family protein | - |
| D9Y32_RS19285 (D9Y32_19310) | - | 3715754..3716041 (-) | 288 | WP_142782682.1 | HNH/ENDO VII family nuclease | - |
| D9Y32_RS19290 (D9Y32_19315) | - | 3716145..3716624 (-) | 480 | WP_075646820.1 | antitoxin YezG family protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 43739.88 Da Isoelectric Point: 5.0023
>NTDB_id=282769 D9Y32_RS19250 WP_009328417.1 3711009..3712115(-) (rapC) [Bacillus licheniformis strain TCCC 11148]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK
Nucleotide
Download Length: 1107 bp
>NTDB_id=282769 D9Y32_RS19250 WP_009328417.1 3711009..3712115(-) (rapC) [Bacillus licheniformis strain TCCC 11148]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
35.544 |
100 |
0.364 |