Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   C7M18_RS19145 Genome accession   NZ_CP028204
Coordinates   3941188..3941565 (-) Length   125 a.a.
NCBI ID   WP_025649851.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102755     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3936188..3946565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M18_RS19105 (C7M18_03847) - 3936685..3937479 (+) 795 WP_014418368.1 YqhG family protein -
  C7M18_RS19110 (C7M18_03848) sinI 3937656..3937829 (+) 174 WP_014418369.1 anti-repressor SinI Regulator
  C7M18_RS19115 (C7M18_03849) sinR 3937863..3938198 (+) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  C7M18_RS19120 (C7M18_03850) tasA 3938246..3939031 (-) 786 WP_007408329.1 biofilm matrix protein TasA -
  C7M18_RS19125 (C7M18_03851) sipW 3939096..3939680 (-) 585 WP_012117977.1 signal peptidase I SipW -
  C7M18_RS19130 (C7M18_03852) tapA 3939652..3940323 (-) 672 WP_014418371.1 amyloid fiber anchoring/assembly protein TapA -
  C7M18_RS19135 (C7M18_03853) - 3940582..3940911 (+) 330 WP_012117979.1 DUF3889 domain-containing protein -
  C7M18_RS19140 (C7M18_03854) - 3940952..3941131 (-) 180 WP_003153093.1 YqzE family protein -
  C7M18_RS19145 (C7M18_03855) comGG 3941188..3941565 (-) 378 WP_025649851.1 competence type IV pilus minor pilin ComGG Machinery gene
  C7M18_RS19150 (C7M18_03856) comGF 3941566..3941961 (-) 396 WP_025649850.1 competence type IV pilus minor pilin ComGF -
  C7M18_RS19155 (C7M18_03857) comGE 3941975..3942289 (-) 315 WP_017418140.1 competence type IV pilus minor pilin ComGE Machinery gene
  C7M18_RS19160 (C7M18_03858) comGD 3942273..3942710 (-) 438 WP_007612572.1 competence type IV pilus minor pilin ComGD Machinery gene
  C7M18_RS19165 (C7M18_03859) comGC 3942700..3943008 (-) 309 WP_014418376.1 competence type IV pilus major pilin ComGC Machinery gene
  C7M18_RS19170 (C7M18_03860) comGB 3943013..3944050 (-) 1038 WP_014418377.1 competence type IV pilus assembly protein ComGB Machinery gene
  C7M18_RS19175 (C7M18_03861) comGA 3944037..3945107 (-) 1071 WP_014418378.1 competence type IV pilus ATPase ComGA Machinery gene
  C7M18_RS19180 (C7M18_03862) - 3945300..3946250 (-) 951 WP_014418379.1 magnesium transporter CorA family protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14151.04 Da        Isoelectric Point: 9.6404

>NTDB_id=282524 C7M18_RS19145 WP_025649851.1 3941188..3941565(-) (comGG) [Bacillus velezensis strain SRCM102755]
MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGALLSSRHMTQGQKGQTGTQRFPYGTVS
FYITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=282524 C7M18_RS19145 WP_025649851.1 3941188..3941565(-) (comGG) [Bacillus velezensis strain SRCM102755]
ATGTACAAATCTGACGGTTTTATATATCCCGCGGTTCTGTTTGTTTCTGCCGCAGTTTTACTTGTCATCAGCTATACTTC
ATCTGATTTCATCACCCGAAAAACATTTGCAAAAGAGGCCGGGGAGTACTGGATCGGAGAGAACCTGCTCCAAAACGGCG
CGCTGCTGTCAAGCCGCCATATGACACAGGGACAAAAGGGCCAAACTGGTACACAGCGTTTTCCGTACGGCACCGTTTCT
TTTTACATCACCGGGAGTGATCGAAGGGAAACGGTTCAGGTTACAATTCAGGCGGAAACCACGACAGGCACGAGACGGGA
GGCTCACCTTTTGTTCGATCAGAAGAAGAAACAGCTGATTCAATGGACGGAAGTATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

52.419

99.2

0.52

Multiple sequence alignment