Detailed information NTG0028251

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LPC_RS13905
• Genome accession: NC_009494
• Coordinates: 3106620..3107705 (+)
• Length: 361 a.a.
• NCBI ID: WP_011947521.1
• Uniprot ID: -
• Organism: Legionella pneumophila str. Corby
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3101620..3112705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPC_RS13880 (LPC_0550)	-	3102013..3102762 (-)	750	WP_011947517.1	type II CAAX prenyl endopeptidase Rce1 family protein	-
LPC_RS13885 (LPC_0549)	rsmB	3102759..3104042 (-)	1284	WP_011947518.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
LPC_RS13890 (LPC_0548)	fmt	3104039..3104983 (-)	945	WP_011947519.1	methionyl-tRNA formyltransferase	-
LPC_RS13895 (LPC_0547)	def	3104980..3105492 (-)	513	WP_010948295.1	peptide deformylase	-
LPC_RS13900 (LPC_0546)	-	3105586..3106623 (+)	1038	WP_011947520.1	LysM peptidoglycan-binding domain-containing protein	-
LPC_RS13905 (LPC_0545)	dprA	3106620..3107705 (+)	1086	WP_011947521.1	DNA-processing protein DprA	Machinery gene
LPC_RS13910 (LPC_0544)	-	3107695..3108132 (+)	438	WP_011947522.1	DUF494 family protein	-
LPC_RS13915 (LPC_0543)	topA	3108212..3110491 (+)	2280	WP_011947523.1	type I DNA topoisomerase	-
LPC_RS13920 (LPC_0542)	-	3110702..3112675 (-)	1974	WP_011947524.1	acyltransferase family protein	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39501.68 Da
• Isoelectric Point: 7.2590

>NTDB_id=28251 LPC_RS13905 WP_011947521.1 3106620..3107705(+) (dprA) [Legionella pneumophila str. Corby]
MNNLQPLLALNRMKKIGPRTVLKLQKRWPDLNLMFQLSSVDLEEAGLPSWLAQTIKNFDPDFIKTDLDWLSSSENHHILT
WDSPYYPALLKEIADPPFILYAKGELSALTQPNLAIVGSRNASVTGNENARAFSREISRHGVSIVSGLALGIDAHAHLGC
LEGGGKTIAVLGTGIDCIYPRRHLKLAEQITENGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLITA
RMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLDELKIEHHQFASNKPIFSLASGKENLVKFIGFETTTI
DQIIGRSGYSMEQVTSGLAELELKGAVMAVPGGYIRCEYER

Nucleotide

• Length: 1086 bp

>NTDB_id=28251 LPC_RS13905 WP_011947521.1 3106620..3107705(+) (dprA) [Legionella pneumophila str. Corby]
ATGAATAATCTGCAACCCCTCCTCGCCTTAAACAGGATGAAAAAAATTGGCCCCCGAACCGTATTAAAACTGCAAAAAAG
ATGGCCTGATTTAAACCTTATGTTCCAACTGTCCAGTGTTGATCTGGAAGAAGCGGGCTTGCCATCCTGGTTGGCACAAA
CCATAAAAAATTTTGATCCGGACTTTATAAAAACTGATTTGGACTGGTTAAGTTCATCAGAAAATCATCATATTTTAACT
TGGGACTCCCCCTATTATCCCGCATTGCTCAAAGAAATAGCCGATCCTCCCTTCATTTTATACGCTAAAGGGGAGCTGTC
CGCCTTGACACAACCCAACCTGGCTATTGTTGGAAGTCGCAATGCTTCTGTAACAGGAAACGAGAATGCCCGAGCATTCT
CCAGGGAAATTTCCAGGCATGGGGTAAGCATAGTGAGCGGTTTAGCCTTGGGAATTGATGCACATGCTCATTTAGGTTGT
CTGGAAGGAGGCGGCAAAACGATAGCGGTCTTAGGTACCGGAATTGATTGTATCTATCCGCGCCGGCATTTAAAATTAGC
TGAGCAAATTACAGAGAATGGTTTATTATTAAGCGAATTTCCTTTAAAAAGTCCACCAATTGCTGGACATTTTCCACTCA
GAAATCGTATAATAAGCGGTCTATCATTATGCATTTTGGTTATCGAGGCAGCAATTAAAAGCGGTTCTTTAATTACAGCA
AGAATGGCTCTGGAACAAAACAGAGATGTATTGGCTATTCCCGGATCGATTCATAACCCGTTAGCCAGGGGCTGCCACTA
CTTATTGCAGCAGGGTGCGAAATTAGTAACTTCAGTGGCTGATGTTCTTGATGAGTTAAAAATTGAGCACCATCAGTTCG
CTTCTAATAAACCAATTTTTTCCCTTGCCAGCGGTAAGGAAAACCTAGTAAAGTTCATTGGTTTTGAAACTACGACTATC
GATCAAATTATTGGTCGTAGCGGATATAGCATGGAACAAGTCACGAGTGGACTGGCTGAACTAGAATTGAAAGGGGCTGT
GATGGCAGTTCCCGGTGGCTATATAAGGTGTGAATATGAAAGATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-277)

• DprA winged helix domain (DprA_WH) (299-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	98.061	100	0.981
dprA	Vibrio cholerae strain A1552	43.164	100	0.446
dprA	Vibrio campbellii strain DS40M4	44.722	99.723	0.446
dprA	Glaesserella parasuis strain SC1401	39.474	100	0.416
dprA	Haemophilus influenzae Rd KW20	46.392	80.609	0.374