Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M18_RS02405 Genome accession   NZ_CP028204
Coordinates   466075..467034 (-) Length   319 a.a.
NCBI ID   WP_233662477.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102755     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 461075..472034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M18_RS02375 (C7M18_00475) - 461358..461834 (+) 477 WP_022553708.1 Na+/H+ antiporter subunit E -
  C7M18_RS02380 (C7M18_00476) - 461834..462118 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  C7M18_RS02385 (C7M18_00477) mnhG 462102..462476 (+) 375 WP_095273327.1 monovalent cation/H(+) antiporter subunit G -
  C7M18_RS02390 (C7M18_00478) - 462516..462899 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  C7M18_RS02395 (C7M18_00479) comA 462921..463565 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  C7M18_RS02400 (C7M18_00480) comP 463646..465949 (-) 2304 WP_160216563.1 histidine kinase Regulator
  C7M18_RS02405 (C7M18_00481) comQ 466075..467034 (-) 960 WP_233662477.1 class 1 isoprenoid biosynthesis enzyme Regulator
  C7M18_RS02410 (C7M18_00482) degQ 467219..467359 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  C7M18_RS02415 (C7M18_00483) - 467825..468166 (+) 342 WP_015418107.1 hypothetical protein -
  C7M18_RS02420 (C7M18_00484) - 468173..469396 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  C7M18_RS02425 (C7M18_00485) - 469526..470992 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  C7M18_RS02430 (C7M18_00486) - 471010..471561 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 319 a.a.        Molecular weight: 36655.97 Da        Isoelectric Point: 5.1474

>NTDB_id=282468 C7M18_RS02405 WP_233662477.1 466075..467034(-) (comQ) [Bacillus velezensis strain SRCM102755]
MKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLCIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMYKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELSGCIKETEKQ

Nucleotide


Download         Length: 960 bp        

>NTDB_id=282468 C7M18_RS02405 WP_233662477.1 466075..467034(-) (comQ) [Bacillus velezensis strain SRCM102755]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAAAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGTATAAGTGTGA
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCGGATGTATTAAAGAAACTGAAAAGCAATGA

Domains


Predicted by InterproScan.

(41-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.938

90.596

0.561


Multiple sequence alignment