Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   C7M18_RS02395 Genome accession   NZ_CP028204
Coordinates   462921..463565 (-) Length   214 a.a.
NCBI ID   WP_014418762.1    Uniprot ID   A0A2Z4EIP2
Organism   Bacillus velezensis strain SRCM102755     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 457921..468565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M18_RS02360 (C7M18_00472) - 459106..459537 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  C7M18_RS02365 (C7M18_00473) - 459537..459878 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  C7M18_RS02370 (C7M18_00474) - 459871..461352 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  C7M18_RS02375 (C7M18_00475) - 461358..461834 (+) 477 WP_022553708.1 Na+/H+ antiporter subunit E -
  C7M18_RS02380 (C7M18_00476) - 461834..462118 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  C7M18_RS02385 (C7M18_00477) mnhG 462102..462476 (+) 375 WP_095273327.1 monovalent cation/H(+) antiporter subunit G -
  C7M18_RS02390 (C7M18_00478) - 462516..462899 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  C7M18_RS02395 (C7M18_00479) comA 462921..463565 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  C7M18_RS02400 (C7M18_00480) comP 463646..465949 (-) 2304 WP_160216563.1 histidine kinase Regulator
  C7M18_RS02405 (C7M18_00481) comQ 466075..467034 (-) 960 WP_233662477.1 class 1 isoprenoid biosynthesis enzyme Regulator
  C7M18_RS02410 (C7M18_00482) degQ 467219..467359 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  C7M18_RS02415 (C7M18_00483) - 467825..468166 (+) 342 WP_015418107.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24302.70 Da        Isoelectric Point: 4.9953

>NTDB_id=282466 C7M18_RS02395 WP_014418762.1 462921..463565(-) (comA) [Bacillus velezensis strain SRCM102755]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTQRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=282466 C7M18_RS02395 WP_014418762.1 462921..463565(-) (comA) [Bacillus velezensis strain SRCM102755]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACACAGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z4EIP2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86

Multiple sequence alignment