Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C7M17_RS20595 Genome accession   NZ_CP028202
Coordinates   3959885..3962197 (+) Length   770 a.a.
NCBI ID   WP_068947635.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102754     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3954885..3967197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS20565 (C7M17_04060) pdeH 3956422..3957651 (+) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  C7M17_RS20570 (C7M17_04061) - 3957627..3957995 (-) 369 WP_014477834.1 hypothetical protein -
  C7M17_RS20575 - 3958110..3958235 (-) 126 WP_141770195.1 hypothetical protein -
  C7M17_RS20580 (C7M17_04062) degQ 3958457..3958597 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M17_RS20585 (C7M17_04063) - 3958782..3959651 (+) 870 WP_015714626.1 polyprenyl synthetase family protein -
  C7M17_RS20590 (C7M17_04064) comX 3959648..3959869 (+) 222 WP_014114983.1 competence pheromone ComX -
  C7M17_RS20595 (C7M17_04065) comP 3959885..3962197 (+) 2313 WP_068947635.1 histidine kinase Regulator
  C7M17_RS20600 (C7M17_04066) comA 3962278..3962922 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M17_RS20605 (C7M17_04067) yuxO 3962941..3963321 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M17_RS20610 (C7M17_04068) mnhG 3963362..3963736 (-) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  C7M17_RS20615 (C7M17_04069) mrpF 3963720..3964004 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M17_RS20620 (C7M17_04070) mrpE 3964004..3964480 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  C7M17_RS20625 (C7M17_04071) mrpD 3964486..3965967 (-) 1482 WP_046160793.1 Na+/H+ antiporter subunit D -
  C7M17_RS20630 (C7M17_04072) mrpC 3965960..3966301 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  C7M17_RS20635 (C7M17_04073) mrpB 3966301..3966732 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89347.36 Da        Isoelectric Point: 8.3122

>NTDB_id=282452 C7M17_RS20595 WP_068947635.1 3959885..3962197(+) (comP) [Bacillus subtilis strain SRCM102754]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFRLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=282452 C7M17_RS20595 WP_068947635.1 3959885..3962197(+) (comP) [Bacillus subtilis strain SRCM102754]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGGTTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCCTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAGATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTATACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.177

99.87

0.561


Multiple sequence alignment