Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M17_RS17535 Genome accession   NZ_CP028202
Coordinates   3355456..3355575 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM102754     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3350456..3360575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS17515 (C7M17_03460) pbpG 3350823..3352898 (-) 2076 WP_015384942.1 transglycosylase domain-containing protein -
  C7M17_RS17520 (C7M17_03461) speE 3353101..3353931 (+) 831 WP_003227543.1 spermidine synthase -
  C7M17_RS17525 (C7M17_03462) speB 3353992..3354864 (+) 873 WP_042975442.1 agmatinase -
  C7M17_RS17530 (C7M17_03463) - 3354929..3355358 (-) 430 Protein_3442 YbaK/EbsC family protein -
  C7M17_RS17535 (C7M17_03464) phrF 3355456..3355575 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C7M17_RS17540 (C7M17_03465) rapF 3355559..3356704 (-) 1146 WP_160245473.1 response regulator aspartate phosphatase RapF Regulator
  C7M17_RS22750 - 3356707..3356937 (+) 231 Protein_3445 hypothetical protein -
  C7M17_RS17550 (C7M17_03466) ywhK 3356934..3358289 (+) 1356 WP_122895636.1 YncE family protein -
  C7M17_RS17555 (C7M17_03467) ywhL 3358328..3359704 (+) 1377 WP_122895637.1 YncE family protein -
  C7M17_RS17560 (C7M17_03468) albG 3359710..3360411 (-) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=282440 C7M17_RS17535 WP_009968329.1 3355456..3355575(-) (phrF) [Bacillus subtilis strain SRCM102754]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282440 C7M17_RS17535 WP_009968329.1 3355456..3355575(-) (phrF) [Bacillus subtilis strain SRCM102754]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment