Detailed information NTG0282441

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M17_RS17540
• Genome accession: NZ_CP028202
• Coordinates: 3355559..3356704 (-)
• Length: 381 a.a.
• NCBI ID: WP_160245473.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102754
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3350559..3361704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M17_RS17515 (C7M17_03460)	pbpG	3350823..3352898 (-)	2076	WP_015384942.1	transglycosylase domain-containing protein	-
C7M17_RS17520 (C7M17_03461)	speE	3353101..3353931 (+)	831	WP_003227543.1	spermidine synthase	-
C7M17_RS17525 (C7M17_03462)	speB	3353992..3354864 (+)	873	WP_042975442.1	agmatinase	-
C7M17_RS17530 (C7M17_03463)	-	3354929..3355358 (-)	430	Protein_3442	YbaK/EbsC family protein	-
C7M17_RS17535 (C7M17_03464)	phrF	3355456..3355575 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
C7M17_RS17540 (C7M17_03465)	rapF	3355559..3356704 (-)	1146	WP_160245473.1	response regulator aspartate phosphatase RapF	Regulator
C7M17_RS22750	-	3356707..3356937 (+)	231	Protein_3445	hypothetical protein	-
C7M17_RS17550 (C7M17_03466)	ywhK	3356934..3358289 (+)	1356	WP_122895636.1	YncE family protein	-
C7M17_RS17555 (C7M17_03467)	ywhL	3358328..3359704 (+)	1377	WP_122895637.1	YncE family protein	-
C7M17_RS17560 (C7M17_03468)	albG	3359710..3360411 (-)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C7M17_RS17565 (C7M17_03469)	albF	3360408..3361688 (-)	1281	WP_032722698.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45604.09 Da
• Isoelectric Point: 5.0624

>NTDB_id=282441 C7M17_RS17540 WP_160245473.1 3355559..3356704(-) (rapF) [Bacillus subtilis strain SRCM102754]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=282441 C7M17_RS17540 WP_160245473.1 3355559..3356704(-) (rapF) [Bacillus subtilis strain SRCM102754]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572