Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C7M17_RS02485 | Genome accession | NZ_CP028202 |
| Coordinates | 431565..431900 (-) | Length | 111 a.a. |
| NCBI ID | WP_160245081.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102754 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 426565..436900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M17_RS02435 (C7M17_00471) | comGC | 426584..426880 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C7M17_RS02440 (C7M17_00472) | comGD | 426870..427301 (+) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| C7M17_RS02445 (C7M17_00473) | comGE | 427285..427632 (+) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| C7M17_RS02450 | comGF | 427658..428041 (+) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| C7M17_RS02455 (C7M17_00475) | comGG | 428042..428416 (+) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| C7M17_RS02460 (C7M17_00476) | spoIITA | 428487..428666 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| C7M17_RS02465 (C7M17_00477) | yqzG | 428708..429034 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| C7M17_RS02470 (C7M17_00478) | tapA | 429306..430067 (+) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M17_RS02475 (C7M17_00479) | sipW | 430051..430623 (+) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| C7M17_RS02480 (C7M17_00480) | tasA | 430687..431472 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| C7M17_RS02485 (C7M17_00481) | sinR | 431565..431900 (-) | 336 | WP_160245081.1 | transcriptional regulator SinR | Regulator |
| C7M17_RS02490 (C7M17_00482) | sinI | 431934..432107 (-) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| C7M17_RS02495 (C7M17_00483) | yqhG | 432290..433084 (-) | 795 | WP_003230200.1 | YqhG family protein | - |
| C7M17_RS02500 (C7M17_00484) | hepAA | 433105..434778 (-) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| C7M17_RS02505 (C7M17_00485) | gcvT | 435220..436308 (+) | 1089 | WP_160245082.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13000.70 Da Isoelectric Point: 7.2023
>NTDB_id=282395 C7M17_RS02485 WP_160245081.1 431565..431900(-) (sinR) [Bacillus subtilis strain SRCM102754]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMISGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMISGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=282395 C7M17_RS02485 WP_160245081.1 431565..431900(-) (sinR) [Bacillus subtilis strain SRCM102754]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGATATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGATATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
99.099 |
100 |
0.991 |