Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C7M16_RS17600 Genome accession   NZ_CP028201
Coordinates   3481901..3482020 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain SRCM102753     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3476901..3487020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS17575 (C7M16_03464) albG 3477064..3477765 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  C7M16_RS17580 (C7M16_03465) ywhL 3477771..3479147 (-) 1377 WP_086344439.1 YncE family protein -
  C7M16_RS17585 (C7M16_03466) ywhK 3479187..3480542 (-) 1356 WP_086344440.1 YncE family protein -
  C7M16_RS20805 - 3480539..3480769 (-) 231 WP_024572000.1 hypothetical protein -
  C7M16_RS17595 (C7M16_03467) rapF 3480772..3481917 (+) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  C7M16_RS17600 (C7M16_03468) phrF 3481901..3482020 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  C7M16_RS17605 (C7M16_03469) - 3482118..3482580 (+) 463 Protein_3467 YbaK/EbsC family protein -
  C7M16_RS17610 (C7M16_03470) speB 3482612..3483484 (-) 873 WP_003227545.1 agmatinase -
  C7M16_RS17615 (C7M16_03471) speE 3483545..3484375 (-) 831 WP_003227543.1 spermidine synthase -
  C7M16_RS17620 (C7M16_03472) pbpG 3484577..3486652 (+) 2076 WP_015384942.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=282368 C7M16_RS17600 WP_041334633.1 3481901..3482020(+) (phrF) [Bacillus subtilis strain SRCM102753]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=282368 C7M16_RS17600 WP_041334633.1 3481901..3482020(+) (phrF) [Bacillus subtilis strain SRCM102753]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment