Detailed information NTG0282367

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M16_RS17595
• Genome accession: NZ_CP028201
• Coordinates: 3480772..3481917 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102753
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3475772..3486917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M16_RS17570 (C7M16_03463)	albF	3475787..3477067 (+)	1281	WP_086344438.1	pitrilysin family protein	-
C7M16_RS17575 (C7M16_03464)	albG	3477064..3477765 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C7M16_RS17580 (C7M16_03465)	ywhL	3477771..3479147 (-)	1377	WP_086344439.1	YncE family protein	-
C7M16_RS17585 (C7M16_03466)	ywhK	3479187..3480542 (-)	1356	WP_086344440.1	YncE family protein	-
C7M16_RS20805	-	3480539..3480769 (-)	231	WP_024572000.1	hypothetical protein	-
C7M16_RS17595 (C7M16_03467)	rapF	3480772..3481917 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
C7M16_RS17600 (C7M16_03468)	phrF	3481901..3482020 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
C7M16_RS17605 (C7M16_03469)	-	3482118..3482580 (+)	463	Protein_3467	YbaK/EbsC family protein	-
C7M16_RS17610 (C7M16_03470)	speB	3482612..3483484 (-)	873	WP_003227545.1	agmatinase	-
C7M16_RS17615 (C7M16_03471)	speE	3483545..3484375 (-)	831	WP_003227543.1	spermidine synthase	-
C7M16_RS17620 (C7M16_03472)	pbpG	3484577..3486652 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=282367 C7M16_RS17595 WP_086344441.1 3480772..3481917(+) (rapF) [Bacillus subtilis strain SRCM102753]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=282367 C7M16_RS17595 WP_086344441.1 3480772..3481917(+) (rapF) [Bacillus subtilis strain SRCM102753]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572