Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LPC_RS05070 | Genome accession | NC_009494 |
| Coordinates | 1110971..1111570 (+) | Length | 199 a.a. |
| NCBI ID | WP_011213355.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Corby | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1105971..1116570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC_RS05055 (LPC_2365) | ravI | 1107917..1108924 (-) | 1008 | WP_011946020.1 | Dot/Icm T4SS effector RavI | - |
| LPC_RS05060 (LPC_2363) | pilM | 1109341..1110405 (+) | 1065 | WP_011946022.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPC_RS05065 (LPC_2362) | pilN | 1110409..1110957 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| LPC_RS05070 (LPC_2361) | pilO | 1110971..1111570 (+) | 600 | WP_011213355.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPC_RS05075 (LPC_2360) | pilP | 1111567..1112151 (+) | 585 | WP_011213356.1 | pilus assembly protein PilP | Machinery gene |
| LPC_RS05080 (LPC_2359) | pilQ | 1112155..1114251 (+) | 2097 | WP_011946023.1 | type IV pilus secretin PilQ | Machinery gene |
| LPC_RS05085 (LPC_2358) | aroK | 1114698..1115225 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LPC_RS05090 (LPC_2357) | aroB | 1115212..1116321 (+) | 1110 | WP_011946024.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22523.24 Da Isoelectric Point: 5.3369
>NTDB_id=28225 LPC_RS05070 WP_011213355.1 1110971..1111570(+) (pilO) [Legionella pneumophila str. Corby]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=28225 LPC_RS05070 WP_011213355.1 1110971..1111570(+) (pilO) [Legionella pneumophila str. Corby]
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATCGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAGACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATACCGGGCACAATGA
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATCGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAGACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATACCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |