Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C7S18_RS13905 Genome accession   NZ_CP027860
Coordinates   3585179..3585577 (-) Length   132 a.a.
NCBI ID   WP_106894033.1    Uniprot ID   -
Organism   Ahniella affigens strain D13     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3580179..3590577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7S18_RS13890 (C7S18_13880) - 3581621..3582499 (-) 879 WP_146151921.1 protein-glutamate O-methyltransferase CheR -
  C7S18_RS13895 (C7S18_13885) - 3582510..3584531 (-) 2022 WP_106892136.1 methyl-accepting chemotaxis protein -
  C7S18_RS13900 (C7S18_13890) - 3584578..3585126 (-) 549 WP_240623897.1 chemotaxis protein CheW -
  C7S18_RS13905 (C7S18_13895) pilG 3585179..3585577 (-) 399 WP_106894033.1 twitching motility response regulator PilG Regulator
  C7S18_RS13910 (C7S18_13900) gshB 3585796..3586746 (+) 951 WP_106892137.1 glutathione synthase -
  C7S18_RS13915 (C7S18_13905) - 3586743..3587606 (+) 864 WP_106892138.1 TonB family protein -
  C7S18_RS13920 (C7S18_13910) - 3587959..3588786 (+) 828 WP_146151922.1 hypothetical protein -
  C7S18_RS13925 (C7S18_13915) - 3588783..3589100 (+) 318 WP_106892140.1 YddF family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14787.24 Da        Isoelectric Point: 7.8538

>NTDB_id=281043 C7S18_RS13905 WP_106894033.1 3585179..3585577(-) (pilG) [Ahniella affigens strain D13]
MEEQAKEGSLSGLKVMVIDDSKTIRRTAETLLKKEGCEVVTATDGFEALAKISDEKPQIIFVDIMMPRLDGYHTCALIKN
NQMFKNVPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRKHVNV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=281043 C7S18_RS13905 WP_106894033.1 3585179..3585577(-) (pilG) [Ahniella affigens strain D13]
ATGGAAGAGCAAGCGAAAGAAGGTTCATTGTCTGGTTTGAAGGTCATGGTCATCGATGATTCGAAGACTATCCGTCGGAC
TGCAGAAACATTGTTGAAGAAGGAAGGCTGTGAAGTGGTCACGGCAACGGACGGCTTTGAGGCGCTGGCCAAGATTTCCG
ACGAGAAGCCGCAAATCATTTTTGTCGACATCATGATGCCCAGGTTGGATGGCTATCACACCTGTGCGTTGATCAAGAAC
AATCAGATGTTCAAAAACGTGCCGGTCATCATGCTGTCCTCGAAGGATGGTCTGTTCGACAAGGCGCGCGGTCGTATCGT
GGGTTCTGAGCAGTATCTGACCAAGCCGTTCACGCGCGAGGAACTGCTCGGCGCGATTCGCAAGCACGTCAACGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

94.697

0.697
  vicR Streptococcus mutans UA159

41.88

88.636

0.371
  pilH Synechocystis sp. PCC 6803

42.105

86.364

0.364

Multiple sequence alignment