Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C7M53_RS01915 Genome accession   NZ_CP027789
Coordinates   359824..360222 (-) Length   132 a.a.
NCBI ID   WP_017473998.1    Uniprot ID   A0AB37GU74
Organism   Bacillus licheniformis strain TAB7     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 354824..365222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS01890 (C7M53_01890) - 355152..355835 (-) 684 WP_003178799.1 amino acid ABC transporter permease -
  C7M53_RS01895 (C7M53_01895) - 355847..356722 (-) 876 WP_119953645.1 transporter substrate-binding domain-containing protein -
  C7M53_RS01900 (C7M53_01900) - 356906..357457 (+) 552 WP_003178803.1 NAD(P)H-dependent oxidoreductase -
  C7M53_RS01905 (C7M53_01905) - 357554..358279 (+) 726 WP_003178804.1 AAA family ATPase -
  C7M53_RS01910 (C7M53_01910) - 358349..359785 (+) 1437 WP_119953953.1 glycoside hydrolase family 1 protein -
  C7M53_RS01915 (C7M53_01915) nin/comJ 359824..360222 (-) 399 WP_017473998.1 competence protein ComJ Regulator
  C7M53_RS01920 (C7M53_01920) nucA/comI 360240..360686 (-) 447 WP_009330244.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  C7M53_RS23290 - 360952..361155 (+) 204 WP_003178812.1 hypothetical protein -
  C7M53_RS01925 (C7M53_01925) - 361161..361964 (+) 804 WP_017473997.1 serine/threonine protein kinase -
  C7M53_RS01930 (C7M53_01930) - 361984..363593 (-) 1610 Protein_358 methyl-accepting chemotaxis protein -
  C7M53_RS01935 (C7M53_01935) - 363786..364526 (-) 741 WP_003178817.1 ribonuclease YeeF family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15034.13 Da        Isoelectric Point: 5.6435

>NTDB_id=280711 C7M53_RS01915 WP_017473998.1 359824..360222(-) (nin/comJ) [Bacillus licheniformis strain TAB7]
MIKKWEAQEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTTGEHAVSFEALENTASSVEVRLNVQKQVLSFNRRVTVPF
EVLYDGVEIASVLSKKLTCDIPQGAYQLTCYTIMPDHSGTAQITYLLDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=280711 C7M53_RS01915 WP_017473998.1 359824..360222(-) (nin/comJ) [Bacillus licheniformis strain TAB7]
TTGATCAAAAAGTGGGAAGCACAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAGAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGATATACAACGGGAGAGCACGCGGTCTCGTTTGAAGCTCTCGAAA
ACACGGCATCTTCAGTAGAAGTCCGTTTGAATGTCCAAAAACAGGTGCTCTCCTTCAACAGGCGCGTCACCGTTCCTTTC
GAAGTGCTTTATGACGGGGTCGAAATTGCAAGCGTTCTATCCAAGAAATTGACATGCGATATCCCGCAAGGCGCCTATCA
GCTGACATGCTATACAATAATGCCTGATCACAGCGGCACTGCACAGATCACCTATCTTCTCGATTTTAAACAGGCTTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

50

96.97

0.485

Multiple sequence alignment