Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   C7K38_RS08270 Genome accession   NZ_CP027783
Coordinates   1683508..1684773 (+) Length   421 a.a.
NCBI ID   WP_123936174.1    Uniprot ID   A0AA38CWN6
Organism   Tetragenococcus osmophilus strain JCM 31126     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678508..1689773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7K38_RS08245 (C7K38_08245) tsf 1679077..1679958 (+) 882 WP_123936169.1 translation elongation factor Ts -
  C7K38_RS08250 (C7K38_08250) pyrH 1680186..1680911 (+) 726 WP_174705899.1 UMP kinase -
  C7K38_RS08255 (C7K38_08255) frr 1680915..1681472 (+) 558 WP_123936171.1 ribosome recycling factor -
  C7K38_RS08260 (C7K38_08260) - 1681758..1682555 (+) 798 WP_123936172.1 isoprenyl transferase -
  C7K38_RS08265 (C7K38_08265) - 1682552..1683358 (+) 807 WP_123936173.1 phosphatidate cytidylyltransferase -
  C7K38_RS08270 (C7K38_08270) eeP 1683508..1684773 (+) 1266 WP_123936174.1 RIP metalloprotease RseP Regulator
  C7K38_RS08275 (C7K38_08275) - 1684853..1686559 (+) 1707 WP_123936175.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46162.85 Da        Isoelectric Point: 4.1145

>NTDB_id=280621 C7K38_RS08270 WP_123936174.1 1683508..1684773(+) (eeP) [Tetragenococcus osmophilus strain JCM 31126]
MKTLITFLIVFSVVVVIHEFGHFYFAKRAGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEEEDELKAG
MPVSLEVDENNEVTKINTSQKVQLENAVPIEVTSYDLTDELKITGFINGNEQNVGTYPVSHEAMIIEEDGTQLRIAPRDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIVIVFLQGGVPNEDSTVLGEVAPDGAAASAGLQSGDEIVSIDQEDTNSWPE
LQQVVQQHPDEELTLEVQRGDQTLEVEATPEGVENQDQEVGQLGVQASLKTGFWDKLIGGVEQSWDTLVQILVALKTLVT
NFSLDQLGGPVAIFELSNQAAQQGVITSLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAVRGKPISEEKEGLITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=280621 C7K38_RS08270 WP_123936174.1 1683508..1684773(+) (eeP) [Tetragenococcus osmophilus strain JCM 31126]
ATGAAGACACTGATTACATTTTTAATCGTCTTCTCAGTAGTTGTGGTGATACATGAATTTGGTCACTTTTATTTTGCTAA
AAGGGCAGGGATTTTGGTCCGAGAATTTTCTATCGGAATGGGTCCTAAATTATTTAGTCATCAAGCTAAAGATGGTACAA
CCTATACTATTCGAGCTATCCCAATGGGTGGTTATGTTCGTATGGCAGGCTACGAAGAAGAAGACGAACTAAAAGCCGGA
ATGCCGGTGTCGTTAGAAGTAGATGAAAACAACGAAGTCACAAAAATTAACACAAGTCAAAAGGTCCAGTTGGAAAACGC
CGTTCCTATAGAAGTAACGAGTTATGATTTAACAGATGAACTAAAAATCACTGGTTTTATTAATGGCAATGAACAAAATG
TTGGAACCTATCCTGTTAGTCATGAAGCTATGATTATAGAAGAAGATGGGACGCAATTACGGATTGCTCCACGCGATGTT
CAGTTTCAATCGGCCAAATTATGGCAAAGAATGTTGACTAACTTTGCTGGTCCAATGAATAACTTTTTACTGACCATTGT
GTTATTTATTGTGATTGTGTTCTTACAAGGTGGGGTGCCTAATGAAGACTCTACTGTACTTGGGGAAGTTGCTCCTGATG
GGGCAGCGGCTTCAGCTGGCTTGCAATCAGGAGATGAAATTGTAAGCATTGACCAAGAAGACACAAATAGTTGGCCTGAA
TTACAACAAGTTGTTCAACAACACCCAGATGAAGAATTGACGCTTGAGGTGCAAAGAGGAGACCAAACCTTAGAAGTAGA
AGCAACACCAGAAGGCGTCGAAAATCAAGATCAAGAGGTAGGACAACTTGGTGTACAAGCTTCTTTAAAAACAGGTTTTT
GGGATAAGCTAATTGGTGGTGTGGAACAAAGTTGGGATACACTTGTTCAAATATTAGTTGCCTTAAAAACACTAGTTACT
AACTTTAGCTTAGATCAACTAGGGGGACCTGTAGCCATTTTTGAATTGTCTAATCAGGCTGCCCAACAAGGCGTCATCAC
CTCCTTATTATTGACGGCAATGATATCTGTAAACTTAGGTATTGTTAATTTATTGCCAATCCCAGGTTTAGATGGTGGCA
AATTATTACTCAATATTGTGGAAGCTGTACGTGGAAAACCGATCAGTGAAGAAAAAGAAGGTCTTATTACTTTGGTAGGA
TTTGGTTTGTTGATGTTATTGATGGTGCTAGTTACTTGGAATGACATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

50.701

100

0.515
  eeP Streptococcus thermophilus LMG 18311

50.467

100

0.513

Multiple sequence alignment