Detailed information NTG0280496

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4L56_RS05765
• Genome accession: NZ_CP032898
• Coordinates: 1181579..1182379 (-)
• Length: 266 a.a.
• NCBI ID: WP_139518692.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 479-C-EK2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1176579..1187379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4L56_RS08330	-	1177456..1177653 (-)	198	WP_306821131.1	hypothetical protein	-
D4L56_RS05725	-	1177643..1178428 (-)	786	WP_139518687.1	hypothetical protein	-
D4L56_RS05730	-	1178428..1178809 (-)	382	Protein_1086	DUF1294 domain-containing protein	-
D4L56_RS05735	-	1179112..1179369 (-)	258	WP_180339187.1	lysozyme	-
D4L56_RS08250	-	1179372..1179600 (-)	229	Protein_1088	glycoside hydrolase family protein	-
D4L56_RS05745	-	1179630..1180196 (-)	567	WP_139518690.1	hypothetical protein	-
D4L56_RS05750	-	1180180..1180485 (-)	306	WP_000699933.1	hypothetical protein	-
D4L56_RS05755	-	1180611..1181069 (-)	459	WP_139518691.1	tetratricopeptide repeat protein	-
D4L56_RS05760	dprB	1181178..1181582 (-)	405	WP_000599172.1	Holliday junction resolvase RuvX	Machinery gene
D4L56_RS05765	dprA	1181579..1182379 (-)	801	WP_139518692.1	DNA-processing protein DprA	Machinery gene
D4L56_RS05770	minE	1182386..1182619 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
D4L56_RS05775	minD	1182616..1183422 (-)	807	WP_139518693.1	septum site-determining protein MinD	-
D4L56_RS05780	ilvC	1183446..1184438 (-)	993	WP_139523725.1	ketol-acid reductoisomerase	-
D4L56_RS05790	-	1184696..1185478 (+)	783	WP_139518696.1	NAD+ synthase	-
D4L56_RS05795	-	1185475..1186413 (+)	939	WP_139518697.1	tetraacyldisaccharide 4'-kinase	-
D4L56_RS05800	pseH	1186346..1186888 (-)	543	WP_139518699.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29903.88 Da
• Isoelectric Point: 8.7885

>NTDB_id=280496 D4L56_RS05765 WP_139518692.1 1181579..1182379(-) (dprA) [Helicobacter pylori strain 479-C-EK2]
MKSHFQYSALENIPKVFDTLKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=280496 D4L56_RS05765 WP_139518692.1 1181579..1182379(-) (dprA) [Helicobacter pylori strain 479-C-EK2]
ATGAAAAGCCATTTCCAATACAGTGCACTAGAGAATATCCCTAAAGTCTTTGATACGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCTGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAGCCCTTATTTGTTTTACCTCAGCGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCATG
A

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41