Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   C7H83_RS10810 Genome accession   NZ_CP027768
Coordinates   2204427..2205692 (-) Length   421 a.a.
NCBI ID   WP_103892692.1    Uniprot ID   -
Organism   Tetragenococcus halophilus strain LMG 26042     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2199427..2210692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7H83_RS10805 (C7H83_10855) - 2202635..2204341 (-) 1707 WP_103892691.1 proline--tRNA ligase -
  C7H83_RS10810 (C7H83_10860) eeP 2204427..2205692 (-) 1266 WP_103892692.1 RIP metalloprotease RseP Regulator
  C7H83_RS10815 (C7H83_10865) - 2205844..2206650 (-) 807 WP_103892693.1 phosphatidate cytidylyltransferase -
  C7H83_RS10820 (C7H83_10870) - 2206647..2207447 (-) 801 WP_103892694.1 isoprenyl transferase -
  C7H83_RS10825 (C7H83_10875) frr 2208380..2208937 (-) 558 WP_103892695.1 ribosome recycling factor -
  C7H83_RS10830 (C7H83_10880) pyrH 2208941..2209660 (-) 720 WP_103892696.1 UMP kinase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46023.76 Da        Isoelectric Point: 4.1275

>NTDB_id=280384 C7H83_RS10810 WP_103892692.1 2204427..2205692(-) (eeP) [Tetragenococcus halophilus strain LMG 26042]
MKTLITFLIVFSVVVVIHEFGHFYFAKKSGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEDEEELKAG
MPVSLEVNENNEVIKINTSSKVQLENAIPLEVTRYDLTEALEITGFVNGNEDNVASYSVNHEAMIIEEDGTQLRIAPSDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIAIVFLQGGVPNEDSTVLGEVDPNGAAATAGLKSGDEIVAIDQEEVSSWPE
LQQTVQQQPDEELSLEVSRDDQTFSVDATPESVESGNQDIGQLGVQASLKTGFWDKVVGGVKESWDMLVQILAALKNLVT
NFSLDQLGGPVAIFQMSDQAAQQGAMTVLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAIRGKPISEEKEGMITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=280384 C7H83_RS10810 WP_103892692.1 2204427..2205692(-) (eeP) [Tetragenococcus halophilus strain LMG 26042]
ATGAAGACATTGATTACATTTTTAATCGTCTTCTCAGTAGTTGTGGTAATACATGAATTTGGACATTTTTATTTTGCTAA
GAAATCGGGCATTTTAGTTCGTGAATTTTCTATTGGCATGGGTCCTAAGCTATTCAGCCACCAAGCTAAAGACGGTACGA
CTTATACCATACGAGCCATACCGATGGGTGGTTATGTTCGGATGGCAGGCTATGAGGATGAAGAAGAACTAAAAGCTGGA
ATGCCGGTATCTTTGGAAGTAAATGAGAACAACGAAGTCATTAAAATCAATACAAGTTCAAAAGTACAGTTAGAAAATGC
GATCCCCTTGGAAGTGACTCGTTATGATTTGACTGAGGCACTTGAAATTACGGGATTTGTTAATGGAAATGAAGATAATG
TAGCAAGCTATTCAGTAAATCATGAAGCGATGATTATTGAAGAAGACGGCACGCAACTGCGTATTGCACCAAGTGATGTA
CAGTTTCAATCTGCTAAATTATGGCAAAGAATGCTGACAAATTTTGCGGGACCTATGAATAATTTCTTATTAACGATTGT
GTTATTCATTGCCATTGTATTTTTACAAGGCGGCGTTCCTAATGAAGACTCAACAGTACTTGGTGAAGTCGATCCTAATG
GTGCAGCAGCAACAGCCGGTTTAAAATCGGGGGATGAAATTGTAGCTATCGATCAAGAAGAAGTATCAAGTTGGCCTGAG
CTGCAACAAACGGTTCAACAACAACCTGATGAAGAGTTATCTCTTGAAGTCAGTCGAGATGACCAAACTTTTTCTGTAGA
TGCAACGCCTGAAAGCGTAGAATCGGGTAATCAAGATATTGGGCAATTGGGCGTACAGGCATCGCTTAAAACTGGTTTTT
GGGACAAAGTAGTAGGCGGTGTGAAAGAAAGTTGGGACATGCTCGTCCAAATTTTAGCTGCCTTAAAAAACTTGGTAACT
AATTTTAGTTTGGACCAATTAGGCGGACCGGTTGCTATTTTCCAAATGTCTGATCAAGCTGCTCAACAGGGCGCTATGAC
AGTCTTACTTTTGACCGCTATGATATCAGTCAATTTAGGGATCGTGAACTTACTACCTATTCCTGGTTTGGACGGTGGAA
AATTACTACTTAATATAGTCGAAGCTATACGAGGAAAACCAATCAGTGAAGAAAAAGAAGGGATGATCACCTTAGTAGGT
TTTGGTTTGTTGATGTTATTAATGGTATTAGTCACTTGGAATGATATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(209-259)

Peptidase family M50 (Peptidase_M50)

(6-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.869

100

0.527
  eeP Streptococcus thermophilus LMD-9

51.869

100

0.527

Multiple sequence alignment