Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   D9C08_RS12525 Genome accession   NZ_CP032872
Coordinates   2383164..2385110 (+) Length   648 a.a.
NCBI ID   WP_069837505.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 2378164..2390110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS12500 (D9C08_12500) def 2378534..2379016 (+) 483 WP_014479759.1 peptide deformylase -
  D9C08_RS12505 (D9C08_12505) fmt 2379021..2379974 (+) 954 WP_014479760.1 methionyl-tRNA formyltransferase -
  D9C08_RS12510 (D9C08_12510) rsmB 2379961..2381304 (+) 1344 WP_015252111.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  D9C08_RS12515 (D9C08_12515) rlmN 2381308..2382399 (+) 1092 WP_069837503.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  D9C08_RS12520 (D9C08_12520) prpC 2382406..2383170 (+) 765 WP_069837504.1 protein-serine/threonine phosphatase PrpC -
  D9C08_RS12525 (D9C08_12525) stkP 2383164..2385110 (+) 1947 WP_069837505.1 serine/threonine protein kinase PrkC Regulator
  D9C08_RS12530 (D9C08_12530) rsgA 2385125..2386021 (+) 897 WP_003232060.1 ribosome small subunit-dependent GTPase A -
  D9C08_RS12535 (D9C08_12535) rpe 2386026..2386679 (+) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  D9C08_RS12540 (D9C08_12540) thiN 2386752..2387396 (+) 645 WP_014479765.1 thiamine diphosphokinase -
  D9C08_RS12545 (D9C08_12545) spoVM 2387468..2387548 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  D9C08_RS12550 (D9C08_12550) rpmB 2387621..2387809 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  D9C08_RS12555 (D9C08_12555) yloU 2388086..2388448 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 648 a.a.        Molecular weight: 71920.59 Da        Isoelectric Point: 4.8182

>NTDB_id=280242 D9C08_RS12525 WP_069837505.1 2383164..2385110(+) (stkP) [Bacillus subtilis subsp. subtilis strain 2KL1]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGHLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
LSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=280242 D9C08_RS12525 WP_069837505.1 2383164..2385110(+) (stkP) [Bacillus subtilis subsp. subtilis strain 2KL1]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTGTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATTGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTGACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCAGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCGTTTCATCGCTATGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTTGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCACTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGACCCTAAAGCGGATACAACAGTCAAAGAAGGCGCCACGGTCACTCTTTATAAAAGCACCGGAAAGGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACGGTAAATGAAGTGAATGACGAGAAAAACGCGGGAACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CTGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACACTTAGAGACTTGAAAACCTACAGTAA
AGAAGCGGCGTCTGGATATCTGGAAGACAACGGATTGAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACATTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTATGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCTGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-261)

PASTA domain (PASTA)

(430-491)

PASTA domain (PASTA)

(360-423)

PASTA domain (PASTA)

(498-558)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.862

89.506

0.366
  stkP Streptococcus pneumoniae D39

40.69

89.506

0.364
  stkP Streptococcus pneumoniae R6

40.69

89.506

0.364
  stkP Streptococcus pneumoniae Rx1

40.517

89.506

0.363