Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   D9C17_RS06570 Genome accession   NZ_CP032863
Coordinates   1184754..1185617 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179754..1190617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS06535 (D9C17_06535) mrpE 1179922..1180398 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  D9C17_RS06540 (D9C17_06540) mrpF 1180398..1180682 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  D9C17_RS06545 (D9C17_06545) mnhG 1180666..1181040 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  D9C17_RS06550 (D9C17_06550) yuxO 1181079..1181459 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  D9C17_RS06555 (D9C17_06555) comA 1181478..1182122 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  D9C17_RS06560 (D9C17_06560) comP 1182203..1184515 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  D9C17_RS06565 (D9C17_06565) comX 1184531..1184752 (-) 222 WP_014480704.1 competence pheromone ComX -
  D9C17_RS06570 (D9C17_06570) comQ 1184754..1185617 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  D9C17_RS06575 (D9C17_06575) degQ 1185802..1185942 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  D9C17_RS06580 (D9C17_06580) - 1186164..1186289 (+) 126 WP_003228793.1 hypothetical protein -
  D9C17_RS06585 (D9C17_06585) - 1186403..1186771 (+) 369 WP_014477834.1 hypothetical protein -
  D9C17_RS06590 (D9C17_06590) pdeH 1186747..1187976 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  D9C17_RS06595 (D9C17_06595) pncB 1188112..1189584 (-) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  D9C17_RS06600 (D9C17_06600) pncA 1189600..1190151 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=279754 D9C17_RS06570 WP_014480705.1 1184754..1185617(-) (comQ) [Bacillus subtilis subsp. subtilis strain N2-2]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=279754 D9C17_RS06570 WP_014480705.1 1184754..1185617(-) (comQ) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439