Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | D9C14_RS16175 | Genome accession | NZ_CP032860 |
| Coordinates | 3082126..3083151 (+) | Length | 341 a.a. |
| NCBI ID | WP_029726516.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain SSJ-1 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3077126..3088151
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C14_RS16140 (D9C14_16140) | ylbE | 3077426..3077665 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| D9C14_RS16145 (D9C14_16145) | ylbF | 3077781..3078230 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| D9C14_RS16150 (D9C14_16150) | ylbG | 3078285..3078557 (+) | 273 | WP_015715839.1 | YlbG family protein | - |
| D9C14_RS16155 (D9C14_16155) | rsmD | 3078880..3079434 (+) | 555 | WP_029726518.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| D9C14_RS16160 (D9C14_16160) | coaD | 3079439..3079924 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| D9C14_RS16165 (D9C14_16165) | spoVV | 3079935..3081161 (-) | 1227 | WP_029726517.1 | dipicolinic acid transporter SpoVV | - |
| D9C14_RS16170 (D9C14_16170) | ylbK | 3081342..3082124 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| D9C14_RS16175 (D9C14_16175) | sepM | 3082126..3083151 (+) | 1026 | WP_029726516.1 | protease DdcP | Regulator |
| D9C14_RS16180 (D9C14_16180) | tmcAL | 3083168..3084415 (-) | 1248 | WP_029726515.1 | nucleotidyltransferase | - |
| D9C14_RS16185 (D9C14_16185) | - | 3084412..3084597 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| D9C14_RS16190 (D9C14_16190) | ylbN | 3084625..3085143 (+) | 519 | WP_014479718.1 | DUF177 domain-containing protein | - |
| D9C14_RS16195 (D9C14_16195) | rpmF | 3085165..3085344 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| D9C14_RS16200 (D9C14_16200) | gerR | 3085490..3086071 (+) | 582 | WP_015715842.1 | sporulation specific transcriptional regulator GerR | - |
| D9C14_RS16205 (D9C14_16205) | ylbP | 3086128..3086610 (-) | 483 | WP_014476736.1 | N-acetyltransferase | - |
| D9C14_RS16210 (D9C14_16210) | panEA | 3086770..3087666 (+) | 897 | WP_015252144.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37650.29 Da Isoelectric Point: 8.1012
>NTDB_id=279520 D9C14_RS16175 WP_029726516.1 3082126..3083151(+) (sepM) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEKGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEKGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=279520 D9C14_RS16175 WP_029726516.1 3082126..3083151(+) (sepM) [Bacillus subtilis subsp. subtilis strain SSJ-1]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAAAAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTTAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAAAAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTTAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |